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The map label for this gene is 188527481

Identifier: 188527481

GI number: 188527481

Start: 669744

End: 670556

Strand: Reverse

Name: 188527481

Synonym: HPSH_03505

Alternate gene names: NA

Gene position: 670556-669744 (Counterclockwise)

Preceding gene: 188527482

Following gene: 188527480

Centisome position: 41.69

GC content: 43.67

Gene sequence:

>813_bases
ATGAAAAAGTTTGTAGTGTTTAAAACGCTCTGTTTATCGGTAGTGTTAGGTAATAGTCTTTTGGCAGCAGAAGGCAGCAC
GGAAGTGCAAAAACAATTGGAAAAGCCAAAAGAGTATAAAGCAGTGAAAGGCGAGAAAAACGCTTGGTATTTGGGGATTA
GCTATCAAGTCGGTCAGGCTTCGCAAAGCGTTAAAAACCCCCCCAAAAGCAGTGAATTTAACTATCCTAAGTTCCCTGTG
GGTAAAACCGACTATCTGGCCGTTATGCAAGGCTTGGGGCTTACTGTGGGTTATAAGCAGTTTTTCGGGGAAAAGAGATG
GTTTGGTGCACGCTATTACGGCTTCATGGATTATGGGCATGCCGTGTTTGGAGCGAACGCTTTGACATCAGATAATGGTG
GGGCGTGCAAACTCAATGAACCATGCGCGACCAAAGTAGGGACAATGGGCAATCTGTCTGACATGTTCACTTATGGTGTG
GGTATTGACACTTTATACAATGTCATCAATAAAGAGGATGCGAGTTTTGGATTCTTTTTTGGGGCTCAAATCGCGGGTAA
CTCTTGGGGGAATACGACAGGGGCCTTTTTGGAAACTAAAAGCCCTTATAAGCACACCTCCTATAGCCTTGATCCGGCGA
TTTTCCAGTTCCTTTTTAATTTAGGGATCCGCACCCATATTGGCCGGCATCAAGAATTTGACTTTGGCGTGAAGATTCCT
ACTATCAATGTTTATTATTTTAACCATGGGAATTTGAGCTTCACTTACCGCCGTCAATACAGCCTTTATGTGGGGTATCG
TTACAATTTCTGA

Upstream 100 bases:

>100_bases
TTTTAAGTTTTAGGGGTGTTTTTCTTAAGAATTTAGGTTTTTTATAGATTATTATGTTATTATTATACGAAATGTAGACT
TTTAGAAGGAAAAATGTTGT

Downstream 100 bases:

>100_bases
TTTAAAACGCTTGTTTTTCTCTAATTGGATTTTCAATTAGAGTTTTCTTACACAATCTCTTGCTTTCTTTTGAAATGTTT
TTGAAAGTTTTTTGAAAATT

Product: outer membrane protein HorF

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein Horl; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HorA; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopD; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein HorI; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKKFVVFKTLCLSVVLGNSLLAAEGSTEVQKQLEKPKEYKAVKGEKNAWYLGISYQVGQASQSVKNPPKSSEFNYPKFPV
GKTDYLAVMQGLGLTVGYKQFFGEKRWFGARYYGFMDYGHAVFGANALTSDNGGACKLNEPCATKVGTMGNLSDMFTYGV
GIDTLYNVINKEDASFGFFFGAQIAGNSWGNTTGAFLETKSPYKHTSYSLDPAIFQFLFNLGIRTHIGRHQEFDFGVKIP
TINVYYFNHGNLSFTYRRQYSLYVGYRYNF

Sequences:

>Translated_270_residues
MKKFVVFKTLCLSVVLGNSLLAAEGSTEVQKQLEKPKEYKAVKGEKNAWYLGISYQVGQASQSVKNPPKSSEFNYPKFPV
GKTDYLAVMQGLGLTVGYKQFFGEKRWFGARYYGFMDYGHAVFGANALTSDNGGACKLNEPCATKVGTMGNLSDMFTYGV
GIDTLYNVINKEDASFGFFFGAQIAGNSWGNTTGAFLETKSPYKHTSYSLDPAIFQFLFNLGIRTHIGRHQEFDFGVKIP
TINVYYFNHGNLSFTYRRQYSLYVGYRYNF
>Mature_270_residues
MKKFVVFKTLCLSVVLGNSLLAAEGSTEVQKQLEKPKEYKAVKGEKNAWYLGISYQVGQASQSVKNPPKSSEFNYPKFPV
GKTDYLAVMQGLGLTVGYKQFFGEKRWFGARYYGFMDYGHAVFGANALTSDNGGACKLNEPCATKVGTMGNLSDMFTYGV
GIDTLYNVINKEDASFGFFFGAQIAGNSWGNTTGAFLETKSPYKHTSYSLDPAIFQFLFNLGIRTHIGRHQEFDFGVKIP
TINVYYFNHGNLSFTYRRQYSLYVGYRYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30310; Mature: 30310

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFVVFKTLCLSVVLGNSLLAAEGSTEVQKQLEKPKEYKAVKGEKNAWYLGISYQVGQA
CCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCHHHHHCCCCCCEEEEEEEEECCCH
SQSVKNPPKSSEFNYPKFPVGKTDYLAVMQGLGLTVGYKQFFGEKRWFGARYYGFMDYGH
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECHHHHCCCCCCCCEEEEEEHHCCC
AVFGANALTSDNGGACKLNEPCATKVGTMGNLSDMFTYGVGIDTLYNVINKEDASFGFFF
HHHCCCEEECCCCCEEEECCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEE
GAQIAGNSWGNTTGAFLETKSPYKHTSYSLDPAIFQFLFNLGIRTHIGRHQEFDFGVKIP
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCEECC
TINVYYFNHGNLSFTYRRQYSLYVGYRYNF
EEEEEEEECCCEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MKKFVVFKTLCLSVVLGNSLLAAEGSTEVQKQLEKPKEYKAVKGEKNAWYLGISYQVGQA
CCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCHHHHHCCCCCCEEEEEEEEECCCH
SQSVKNPPKSSEFNYPKFPVGKTDYLAVMQGLGLTVGYKQFFGEKRWFGARYYGFMDYGH
HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECHHHHCCCCCCCCEEEEEEHHCCC
AVFGANALTSDNGGACKLNEPCATKVGTMGNLSDMFTYGVGIDTLYNVINKEDASFGFFF
HHHCCCEEECCCCCEEEECCCHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCEEEEE
GAQIAGNSWGNTTGAFLETKSPYKHTSYSLDPAIFQFLFNLGIRTHIGRHQEFDFGVKIP
EEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCEECC
TINVYYFNHGNLSFTYRRQYSLYVGYRYNF
EEEEEEEECCCEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA