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The map label for this gene is 188527464

Identifier: 188527464

GI number: 188527464

Start: 650820

End: 651221

Strand: Reverse

Name: 188527464

Synonym: HPSH_03410

Alternate gene names: NA

Gene position: 651221-650820 (Counterclockwise)

Preceding gene: 188527465

Following gene: 188527463

Centisome position: 40.49

GC content: 37.56

Gene sequence:

>402_bases
TTGTGGGAAAATTACCGCGCGTGCTATAGCGAGCAGTTTCATTTGGATTTAATGGATAGCTTGAGCCATTATGGATCCGT
TAGGGGGTTGAATCTAAATGGCGTTTGCTCTATGATGAATATTCCTGGTAAATTTGATGTGAGCGGGGATTTAGTGCATG
CGATTTATTACAACCCACATTTAAGCCAAAAGGAGAAAAAAGGCGTTATTGACAGCTATTGCCAAAGCGATGCGCTTAAC
ACTTACTGGCTTTTTTTGAAATACGAAGTGTTAAAAGGCACTTTAAATAAAGAGCAATACCTTGGGCTATTGAGCGATTT
TTTAGAAAAATTCCCTAAGGAAAAATCCTATTCAAGCGTTTTTATTAACGCTTTAGAGAAAGAAATTAGGGAGTTTGCTT
AA

Upstream 100 bases:

>100_bases
ATCATGCATGAAACTTATATTCTATTATTTAAGATGTTGTGAATTTTAGAGAAACTATCTATTGAAATTTTTCAACAACC
CCTAAAAATATTTTTTATGA

Downstream 100 bases:

>100_bases
AACCCTATAATTCCCTATTAAACTCCTATTGAAACCTTATTGGATAATCAAAACCAAAATATGGGTATTTATACTAACTT
ATAAGATAGGCTATAGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein WlaX; 3-5' Exonuclease PolB-Like Protein; Large-Conductance Mechanosensitive Channel; 3-5' Exonuclease

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MWENYRACYSEQFHLDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGVIDSYCQSDALN
TYWLFLKYEVLKGTLNKEQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA

Sequences:

>Translated_133_residues
MWENYRACYSEQFHLDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGVIDSYCQSDALN
TYWLFLKYEVLKGTLNKEQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA
>Mature_133_residues
MWENYRACYSEQFHLDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPHLSQKEKKGVIDSYCQSDALN
TYWLFLKYEVLKGTLNKEQYLGLLSDFLEKFPKEKSYSSVFINALEKEIREFA

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15457; Mature: 15457

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWENYRACYSEQFHLDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPH
CCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCC
LSQKEKKGVIDSYCQSDALNTYWLFLKYEVLKGTLNKEQYLGLLSDFLEKFPKEKSYSSV
CCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH
FINALEKEIREFA
HHHHHHHHHHHCC
>Mature Secondary Structure
MWENYRACYSEQFHLDLMDSLSHYGSVRGLNLNGVCSMMNIPGKFDVSGDLVHAIYYNPH
CCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCC
LSQKEKKGVIDSYCQSDALNTYWLFLKYEVLKGTLNKEQYLGLLSDFLEKFPKEKSYSSV
CCCHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHH
FINALEKEIREFA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA