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The map label for this gene is 188527274

Identifier: 188527274

GI number: 188527274

Start: 463443

End: 464840

Strand: Direct

Name: 188527274

Synonym: HPSH_02405

Alternate gene names: NA

Gene position: 463443-464840 (Clockwise)

Preceding gene: 188527273

Following gene: 188527276

Centisome position: 28.81

GC content: 39.48

Gene sequence:

>1398_bases
TTGAAAATTAAGAAATATTTTTCTAACTCTTTGTTTTTTTTGCTTTTTTCTAGTCTCTTTTTGTCCAAACTTCAAGCTTA
TAAATTCAACATGAGCATTGTTGGAAAGGTGAGCAGCTATACCAAGTTTGGCTTTAACAACCAAAGATACCAGCCTTCTA
AAGACATTTATCCTACAGGTAGCTACACTTCTTTACTCGGCGAATTTAATTTGAGCATGGGGTTATACAAGGGTTTGAGA
GCGGAAGTGGGGGCTATGATGGCAGCGCTTCCCTATGACTCTACCGCCTATCAAGGCAACAATATCCCTAATGGCCAGCC
CGGCTCTAGGACCGATCCTTTTGGGGCGGGTATCTTTTGGCAATATATTGGTTGGTATGCGGGGCATAGTGGTTTGCAAG
TGCAAAAACCTCGTTTAGCCATGGTGCATAACGCTTTTTTGAGCTACAACTACAAAAAAGACAAATTCAGTTTTGGCGTG
AAAGGGGGGCGCTATGATGCTGAAGAGTATGATTGGTTCACTTCTTACACTCAAGGGGTTGAAGGCTTTGTCAAATATAA
AGACACTAGGTTAAGGGTGATGTATTCAGACGCTAGGGCTTCAGCGTCAAGCGACTGGTTTTGGTATTTTGGGCGCTACT
ATACAAGCGGTAAGGCTTTAATGATTGCGGATTTGAAATATGAAAAAGACAATCTAAAAATCAACCCTTATTTTTATGCG
ATCTTTCAAAGAATGTATGCACCAGGCATTAATATCACTTATGACACCAACCCTAATTTCAACAATAAAGGCTTTCGTTT
TGTAGGCACTTTCGTGGGGTTTTTCCCCATTTTTCCCACTCCAGCCAATCAGAATGATATTATTCTCTTCCAACAAGTGC
CGTTAGGAAAAAGCGGGCAAACTTATTTCTTCCGCACTCGTTTTTACTATAACAAGTGGCAATTTGGGGGCAGTGTCTAT
AAAAATATCGGTAACGCTAATGGTGATATAGGTATTTATGGGGATCCTTTGGGGTACAACATCTGGACGAATAGTATTTA
TGACGCAGAAATTAACAATATTGTTGGCGCTGATGTTATTAACGGGTTTTTGTATGTAGGCTCACAATATAGAGGGTTTA
GTTGGAAAATTTTAGGTCGTTGGACGGATAGCCCAAGGGCTGATGAAAGGAGTCTTGCGCTCTTTTTGAGTTATTTTTCT
AATAAGTATAATATTAGAATGGATTTAAAACTAGAATATTATGGCAATATCACCAAAAAAGGCTATTGTATTGGGTATTG
TGGCATGTATGTTCCAGTCGATCCTAACGGACCTGGGACACAGCCTTTAACGCACAATGTGTATTCTGACAGGAGCCATA
TAATGTTTAACATTACTTATGGTTTTAGGATTTACTAG

Upstream 100 bases:

>100_bases
TTTGATGACACACATTAGTTATAGTTTCTAAGAGAGTTTCCCTATCTCTTAGATATGCCTTTTTTGTATTTTTATTTTAG
TATCTTTGGGAGTTAGGGTT

Downstream 100 bases:

>100_bases
CATTTTATCCTTAATGGATATTTTTGATTAGCCTTTTTAAAATATGAAAAGGCTCTGCTCCAATCAAATATTAATACTCA
AAAAGTCTTATTTAACTTTA

Product: putative Outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD; Outermembrane Protein HofE

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKIKKYFSNSLFFLLFSSLFLSKLQAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTGSYTSLLGEFNLSMGLYKGLR
AEVGAMMAALPYDSTAYQGNNIPNGQPGSRTDPFGAGIFWQYIGWYAGHSGLQVQKPRLAMVHNAFLSYNYKKDKFSFGV
KGGRYDAEEYDWFTSYTQGVEGFVKYKDTRLRVMYSDARASASSDWFWYFGRYYTSGKALMIADLKYEKDNLKINPYFYA
IFQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFPTPANQNDIILFQQVPLGKSGQTYFFRTRFYYNKWQFGGSVY
KNIGNANGDIGIYGDPLGYNIWTNSIYDAEINNIVGADVINGFLYVGSQYRGFSWKILGRWTDSPRADERSLALFLSYFS
NKYNIRMDLKLEYYGNITKKGYCIGYCGMYVPVDPNGPGTQPLTHNVYSDRSHIMFNITYGFRIY

Sequences:

>Translated_465_residues
MKIKKYFSNSLFFLLFSSLFLSKLQAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTGSYTSLLGEFNLSMGLYKGLR
AEVGAMMAALPYDSTAYQGNNIPNGQPGSRTDPFGAGIFWQYIGWYAGHSGLQVQKPRLAMVHNAFLSYNYKKDKFSFGV
KGGRYDAEEYDWFTSYTQGVEGFVKYKDTRLRVMYSDARASASSDWFWYFGRYYTSGKALMIADLKYEKDNLKINPYFYA
IFQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFPTPANQNDIILFQQVPLGKSGQTYFFRTRFYYNKWQFGGSVY
KNIGNANGDIGIYGDPLGYNIWTNSIYDAEINNIVGADVINGFLYVGSQYRGFSWKILGRWTDSPRADERSLALFLSYFS
NKYNIRMDLKLEYYGNITKKGYCIGYCGMYVPVDPNGPGTQPLTHNVYSDRSHIMFNITYGFRIY
>Mature_465_residues
MKIKKYFSNSLFFLLFSSLFLSKLQAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTGSYTSLLGEFNLSMGLYKGLR
AEVGAMMAALPYDSTAYQGNNIPNGQPGSRTDPFGAGIFWQYIGWYAGHSGLQVQKPRLAMVHNAFLSYNYKKDKFSFGV
KGGRYDAEEYDWFTSYTQGVEGFVKYKDTRLRVMYSDARASASSDWFWYFGRYYTSGKALMIADLKYEKDNLKINPYFYA
IFQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFPTPANQNDIILFQQVPLGKSGQTYFFRTRFYYNKWQFGGSVY
KNIGNANGDIGIYGDPLGYNIWTNSIYDAEINNIVGADVINGFLYVGSQYRGFSWKILGRWTDSPRADERSLALFLSYFS
NKYNIRMDLKLEYYGNITKKGYCIGYCGMYVPVDPNGPGTQPLTHNVYSDRSHIMFNITYGFRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53525; Mature: 53525

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKYFSNSLFFLLFSSLFLSKLQAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTG
CCCHHHHCCHHHHHHHHHHHHHHHHHEEECEEEEEECCHHEECCCCCCCCCCCCCCCCCC
SYTSLLGEFNLSMGLYKGLRAEVGAMMAALPYDSTAYQGNNIPNGQPGSRTDPFGAGIFW
CHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QYIGWYAGHSGLQVQKPRLAMVHNAFLSYNYKKDKFSFGVKGGRYDAEEYDWFTSYTQGV
HHHHHHCCCCCCEEECCHHHHEEHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCC
EGFVKYKDTRLRVMYSDARASASSDWFWYFGRYYTSGKALMIADLKYEKDNLKINPYFYA
CEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEEEEECCCCEEECHHHHH
IFQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFPTPANQNDIILFQQVPLGKSGQ
HHHHHHCCCCEEEECCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
TYFFRTRFYYNKWQFGGSVYKNIGNANGDIGIYGDPLGYNIWTNSIYDAEINNIVGADVI
EEEEEEEEEEEEEECCCHHHHHCCCCCCCEEEEECCCCCEEECCCEEECHHCCCCCHHHH
NGFLYVGSQYRGFSWKILGRWTDSPRADERSLALFLSYFSNKYNIRMDLKLEYYGNITKK
CCEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCC
GYCIGYCGMYVPVDPNGPGTQPLTHNVYSDRSHIMFNITYGFRIY
CEEEEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MKIKKYFSNSLFFLLFSSLFLSKLQAYKFNMSIVGKVSSYTKFGFNNQRYQPSKDIYPTG
CCCHHHHCCHHHHHHHHHHHHHHHHHEEECEEEEEECCHHEECCCCCCCCCCCCCCCCCC
SYTSLLGEFNLSMGLYKGLRAEVGAMMAALPYDSTAYQGNNIPNGQPGSRTDPFGAGIFW
CHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QYIGWYAGHSGLQVQKPRLAMVHNAFLSYNYKKDKFSFGVKGGRYDAEEYDWFTSYTQGV
HHHHHHCCCCCCEEECCHHHHEEHHHHCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCC
EGFVKYKDTRLRVMYSDARASASSDWFWYFGRYYTSGKALMIADLKYEKDNLKINPYFYA
CEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEEEEECCCCEEECHHHHH
IFQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFPTPANQNDIILFQQVPLGKSGQ
HHHHHHCCCCEEEECCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
TYFFRTRFYYNKWQFGGSVYKNIGNANGDIGIYGDPLGYNIWTNSIYDAEINNIVGADVI
EEEEEEEEEEEEEECCCHHHHHCCCCCCCEEEEECCCCCEEECCCEEECHHCCCCCHHHH
NGFLYVGSQYRGFSWKILGRWTDSPRADERSLALFLSYFSNKYNIRMDLKLEYYGNITKK
CCEEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCCC
GYCIGYCGMYVPVDPNGPGTQPLTHNVYSDRSHIMFNITYGFRIY
CEEEEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA