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The map label for this gene is 188527273

Identifier: 188527273

GI number: 188527273

Start: 461787

End: 463373

Strand: Direct

Name: 188527273

Synonym: HPSH_02400

Alternate gene names: NA

Gene position: 461787-463373 (Clockwise)

Preceding gene: 188527270

Following gene: 188527274

Centisome position: 28.71

GC content: 44.23

Gene sequence:

>1587_bases
ATGAAATTAAAGAAACGAAAAGTTGTAGCTACATTGCTAAAGCGTTTTACCTTGCCACTATTGTTCACTACGGGTTCATT
AGGGGCGGTTACTTATGAAGTGCATGGGGATTTTATCAACTTCTCCAAAGTGGGTTTTAACCATTCGCCTATTAACCCTG
TTAAAGGTATCTATCCCACAGAAACTTTTGTTAACCTTACGGGTAAGCTAGAGGGGTCTGTGCATTTAGGTAGGGGATGG
ACCGTGAATTTAGGCGGTGTTTTGGGCGGACAAGTTTATGATAGCACTAGGTATGATGGGTGGGCAAAGGATTTTACCCC
CCCAAGCTATTGGGATAAAACTTCTTGTGGCACTGATTCTATGAGCCTTTGTATGAACGCCACTAAAATGTGGCAACAGC
AAGGGCCAGGTGGTGTCATTAACCCTAGAGGTATTGGTTGGGAATATATGGGTGAGTGGAACGGCTTGTTCCCTAACTAC
TATCCGGCTAACGCTTACTTGCCTGGGCATTCAAGGCGCTATGAAGTTTATAAAGCGAATCTCACCTATGATAGCGATAG
AGTCCATATGGTAATGGGGCGCTTTGATGTTACTGAGCAGGAGCAAATGGATTGGGTTTACCAATTGTTCCAAGGTTTTT
ATGGGACTTTTAAGCTCACGAATAAGATGAAGTTTTTGCTCTTTAGCTCTTGGGGTCGTGGTATCGCTGATGGTCAGTGG
TTGTTCCCTATCTATCGTGAAAAGCCTTGGGGTATTCATAAAGCCGGTATTATTTATCGCCCTACAAAGAATTTAATGAT
CCACCCTTATGTGTATCTTATCCCAGAAGTAGAAACAGATCCCGGTGTTAAAATAGAGTATGATACCAATCCGGGGTTTA
GTGGTAGGGGCATTAGGAATAGAACGGCTTTCTATGCGTTATACAGCTATCGTTGGAATAACGCTGAATACGGTCGTTAC
GCGCCCGCTCGTTATAACACTTGGGATCCGTTCTTGGATAATGGTAAGTGGCGTGGCTTGCAAGGTCCTGGTGGTGCGAC
GCTCTTTTTACGCCACCATATAGATATTAACAACTACTTTGTGGTTGGTGGTGCTTATCTCAACATTGGTAACCCTAACA
TGAACTTAGGTACTTGGGGTAACATCATCGCTGTGGATGGTATCGAACAATGGGTTGGCAGTATCTACAGCTTAGGGTTT
GCGGGGATTGACAACATTACCGATGCTGACGCGTTCACCGAGTATGTTAAAGGTGGAGGCAAGCATGGTAAGTTCAGTTG
GAGCGTTTATCAACGCTTCACTACCGCTCCAAGGGCTTTGGAATATGGTATTGGTATGTATCTAGACTATCAGTTCAGCA
AGCATGTTAAAGCGGGTCTCAAACTCGTATGGTTAGAGTTCCAAATCCGTGCGGGTTACAACCCTGGAACCGGTTTCCTT
GGGCCAAACGGGCAACCGCTTAACTTGAATAATGGTTTGTTTGAATCTTCTGCGTTCGCACAAGGTCCTCAAGACATGGG
TGGCATTAAAAAGAGTATCACCCAAGACAGAAGCCATTTGATGACACACATTAGTTATAGTTTCTAA

Upstream 100 bases:

>100_bases
AGAAAAATTAGCTTGATTTTAAACTAATTCTATATTCTTTTATGCTACAATTATTTCTACAGAGTAATTTATCTATTCTC
AGGTAAAGTAAGGAAGAGGA

Downstream 100 bases:

>100_bases
GAGAGTTTCCCTATCTCTTAGATATGCCTTTTTTGTATTTTTATTTTAGTATCTTTGGGAGTTAGGGTTTTGAAAATTAA
GAAATATTTTTCTAACTCTT

Product: outer membrane protein HofC

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD; Outermembrane Protein HofE

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MKLKKRKVVATLLKRFTLPLLFTTGSLGAVTYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKLEGSVHLGRGW
TVNLGGVLGGQVYDSTRYDGWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWQQQGPGGVINPRGIGWEYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSDRVHMVMGRFDVTEQEQMDWVYQLFQGFYGTFKLTNKMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLMIHPYVYLIPEVETDPGVKIEYDTNPGFSGRGIRNRTAFYALYSYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLFLRHHIDINNYFVVGGAYLNIGNPNMNLGTWGNIIAVDGIEQWVGSIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKHVKAGLKLVWLEFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQDMGGIKKSITQDRSHLMTHISYSF

Sequences:

>Translated_528_residues
MKLKKRKVVATLLKRFTLPLLFTTGSLGAVTYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKLEGSVHLGRGW
TVNLGGVLGGQVYDSTRYDGWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWQQQGPGGVINPRGIGWEYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSDRVHMVMGRFDVTEQEQMDWVYQLFQGFYGTFKLTNKMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLMIHPYVYLIPEVETDPGVKIEYDTNPGFSGRGIRNRTAFYALYSYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLFLRHHIDINNYFVVGGAYLNIGNPNMNLGTWGNIIAVDGIEQWVGSIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKHVKAGLKLVWLEFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQDMGGIKKSITQDRSHLMTHISYSF
>Mature_528_residues
MKLKKRKVVATLLKRFTLPLLFTTGSLGAVTYEVHGDFINFSKVGFNHSPINPVKGIYPTETFVNLTGKLEGSVHLGRGW
TVNLGGVLGGQVYDSTRYDGWAKDFTPPSYWDKTSCGTDSMSLCMNATKMWQQQGPGGVINPRGIGWEYMGEWNGLFPNY
YPANAYLPGHSRRYEVYKANLTYDSDRVHMVMGRFDVTEQEQMDWVYQLFQGFYGTFKLTNKMKFLLFSSWGRGIADGQW
LFPIYREKPWGIHKAGIIYRPTKNLMIHPYVYLIPEVETDPGVKIEYDTNPGFSGRGIRNRTAFYALYSYRWNNAEYGRY
APARYNTWDPFLDNGKWRGLQGPGGATLFLRHHIDINNYFVVGGAYLNIGNPNMNLGTWGNIIAVDGIEQWVGSIYSLGF
AGIDNITDADAFTEYVKGGGKHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKHVKAGLKLVWLEFQIRAGYNPGTGFL
GPNGQPLNLNNGLFESSAFAQGPQDMGGIKKSITQDRSHLMTHISYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59721; Mature: 59721

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKRKVVATLLKRFTLPLLFTTGSLGAVTYEVHGDFINFSKVGFNHSPINPVKGIYPT
CCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC
ETFVNLTGKLEGSVHLGRGWTVNLGGVLGGQVYDSTRYDGWAKDFTPPSYWDKTSCGTDS
CEEEEEEEEECCCEEECCCEEEEECCEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
MSLCMNATKMWQQQGPGGVINPRGIGWEYMGEWNGLFPNYYPANAYLPGHSRRYEVYKAN
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LTYDSDRVHMVMGRFDVTEQEQMDWVYQLFQGFYGTFKLTNKMKFLLFSSWGRGIADGQW
EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCCCEE
LFPIYREKPWGIHKAGIIYRPTKNLMIHPYVYLIPEVETDPGVKIEYDTNPGFSGRGIRN
EEEEECCCCCCEECCCEEECCCCCCEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCC
RTAFYALYSYRWNNAEYGRYAPARYNTWDPFLDNGKWRGLQGPGGATLFLRHHIDINNYF
CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCEE
VVGGAYLNIGNPNMNLGTWGNIIAVDGIEQWVGSIYSLGFAGIDNITDADAFTEYVKGGG
EEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
KHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKHVKAGLKLVWLEFQIRAGYNPGTGFL
CCCCEEHHHHHHHHCCCHHHHHCCCEEEEECHHHHHHCCEEEEEEEEEEEECCCCCCCCC
GPNGQPLNLNNGLFESSAFAQGPQDMGGIKKSITQDRSHLMTHISYSF
CCCCCEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLKKRKVVATLLKRFTLPLLFTTGSLGAVTYEVHGDFINFSKVGFNHSPINPVKGIYPT
CCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC
ETFVNLTGKLEGSVHLGRGWTVNLGGVLGGQVYDSTRYDGWAKDFTPPSYWDKTSCGTDS
CEEEEEEEEECCCEEECCCEEEEECCEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
MSLCMNATKMWQQQGPGGVINPRGIGWEYMGEWNGLFPNYYPANAYLPGHSRRYEVYKAN
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
LTYDSDRVHMVMGRFDVTEQEQMDWVYQLFQGFYGTFKLTNKMKFLLFSSWGRGIADGQW
EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCCCEE
LFPIYREKPWGIHKAGIIYRPTKNLMIHPYVYLIPEVETDPGVKIEYDTNPGFSGRGIRN
EEEEECCCCCCEECCCEEECCCCCCEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCC
RTAFYALYSYRWNNAEYGRYAPARYNTWDPFLDNGKWRGLQGPGGATLFLRHHIDINNYF
CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEECCCCEE
VVGGAYLNIGNPNMNLGTWGNIIAVDGIEQWVGSIYSLGFAGIDNITDADAFTEYVKGGG
EEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
KHGKFSWSVYQRFTTAPRALEYGIGMYLDYQFSKHVKAGLKLVWLEFQIRAGYNPGTGFL
CCCCEEHHHHHHHHCCCHHHHHCCCEEEEECHHHHHHCCEEEEEEEEEEEECCCCCCCCC
GPNGQPLNLNNGLFESSAFAQGPQDMGGIKKSITQDRSHLMTHISYSF
CCCCCEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA