| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is modB [H]
Identifier: 188527260
GI number: 188527260
Start: 448401
End: 449075
Strand: Direct
Name: modB [H]
Synonym: HPSH_02335
Alternate gene names: 188527260
Gene position: 448401-449075 (Clockwise)
Preceding gene: 188527259
Following gene: 188527261
Centisome position: 27.88
GC content: 36.89
Gene sequence:
>675_bases ATGGATCATGAGTTTTTGATTACCATGCGTTTGAGCTTTTCTTTAGCCTTTATTACCACCCTTATTTTACTCCCTATAGG GATTTTTTTAGGCTATTTTTTAAGCCTTAAACGCAATCTTTTAACGAGCTTGACAGAAACGCTTGTGTACATGCCTTTAG TTTTACCCCCAAGCGTGCTAGGGTTTTATCTTCTTTTAATTTTTTCGCCTTCTTCTTTTTTGGGAGCGTTTTTACAAGAT GCGTTAAATGTGAAACTTGTTTTTAGTTTTCAAGGGCTTATTTTAGGGAGTGTGATTTTTTCTTTACCCTTTATGGTAAG CCCTATTAAAAGCGCGTTAATTTCCTTGCCCACTTCTTTAAAAGAAGCCAGTTATAGTTTGGGTAAAGGGGAATATTACA CCCTTTTTTTTGTCCTACTCCCTAACATCAAACCCAGTTTATTGATGGCTATCATTACAACTTTTACGCACACTATAGGT GAATTTGGCGTGGTAATGATGCTTGGGGGTGATATATTAGGGGAAACAAGAGTGGCCAGTATTGCGGTTTTTAACGAAAC TGAAGCGCTCAATTACCCTAAAGCCCACCAATACGCCTTAACGCTCACGCTTATCAGTTTTAGTCTCTTATTTGTTACCC TATTTTTGAATAAAAAACAAAGCTCGTTTTTATGA
Upstream 100 bases:
>100_bases AGCCAAAGTCTTTAAAGATTTTTTATTCAGCCCTAAAGCCAGAGCTATTTTTAAAGAATACGGCTATATTGTGGATTAAA GCGCATAAAAAAGGCGAACA
Downstream 100 bases:
>100_bases TAAAAGCGCGATTTAAAAAACACCTTTTAGGATCTAGGGGCGCGTTTGATTTGAATATAGACTTAGAAATTAAAGAAGCA GAAGTTGTGGCTTTATTAGG
Product: molybdenum ABC transporter ModB
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDHEFLITMRLSFSLAFITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQD ALNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIG EFGVVMMLGGDILGETRVASIAVFNETEALNYPKAHQYALTLTLISFSLLFVTLFLNKKQSSFL
Sequences:
>Translated_224_residues MDHEFLITMRLSFSLAFITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQD ALNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIG EFGVVMMLGGDILGETRVASIAVFNETEALNYPKAHQYALTLTLISFSLLFVTLFLNKKQSSFL >Mature_224_residues MDHEFLITMRLSFSLAFITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQD ALNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIG EFGVVMMLGGDILGETRVASIAVFNETEALNYPKAHQYALTLTLISFSLLFVTLFLNKKQSSFL
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=208, Percent_Identity=27.8846153846154, Blast_Score=95, Evalue=3e-21, Organism=Escherichia coli, GI1786980, Length=217, Percent_Identity=29.4930875576037, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI87082099, Length=179, Percent_Identity=31.2849162011173, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24820; Mature: 24820
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHEFLITMRLSFSLAFITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GFYLLLIFSPSSFLGAFLQDALNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSL HHHHHHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KEASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIGEFGVVMMLGGDILGETRVAS HHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHE IAVFNETEALNYPKAHQYALTLTLISFSLLFVTLFLNKKQSSFL EEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MDHEFLITMRLSFSLAFITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GFYLLLIFSPSSFLGAFLQDALNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSL HHHHHHHHCCHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KEASYSLGKGEYYTLFFVLLPNIKPSLLMAIITTFTHTIGEFGVVMMLGGDILGETRVAS HHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHE IAVFNETEALNYPKAHQYALTLTLISFSLLFVTLFLNKKQSSFL EEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8491722 [H]