| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is modA [H]
Identifier: 188527259
GI number: 188527259
Start: 447639
End: 448379
Strand: Direct
Name: modA [H]
Synonym: HPSH_02330
Alternate gene names: 188527259
Gene position: 447639-448379 (Clockwise)
Preceding gene: 188527233
Following gene: 188527260
Centisome position: 27.83
GC content: 35.09
Gene sequence:
>741_bases ATGAAAAATACTTTCAAAGCGTTTGCCTTTTTAATCGTATTTTTTTCAAGCGCTCTGTTGGCACAGGATTTAAAAATCGC TGTTGCTGCTAATCTCACGCACGCTTTAAAAGCCCTTGTTAAAGAATTTCAAAAAGAACACCCAAAAGACGCTATTAGTA TTAGCTTTAATTCTTCAGGCAAACTCTACGCTCAAATCATTCAAAACGCCCCTTTTGATTTATTCATTTCAGCAGATATT GCTAGACCTAAAAAACTTTATGATGAAAAAATAACCCCTTTTAAAGAAGAAGTCTATGCTAAAGGCGTGTTGGTTTTGTG GAGCGAAAATCTAAAGATGGATTCTTTAGAAATTCTTAAAAATCCTAAAATCAAGCGTATCGCTATGGCTAATCCTAAAC TGGCCCCTTATGGAAAAGCTAGCATGGAAGTCTTAGATCATTTAAAGCTCGCTTCCAGTCTTAAATCCAAAATCGTTTAT GGCGCTTCTATTTCTCAAGCCCATCAATTTGTCGCTACTAAAAACGCTCAAATAGGCTTTGGAGCGTTATCCTTGATTGA TAAAAAAGATAAAAACCTCTCTTATTTCATCATTGATAAAGCCCTTTATAGCCCTATTGAACAAGCCTTGATTACCACTA AAAATGGGGCTAATAACCCTTTAGCCAAAGTCTTTAAAGATTTTTTATTCAGCCCTAAAGCCAGAGCTATTTTTAAAGAA TACGGCTATATTGTGGATTAA
Upstream 100 bases:
>100_bases GGATAGACCTACAAAACCACTTCAAACTTTTAAAATGCAAATTTTTAAAATACAAATTAGGTATAATCACCAATTCCAAT CATTTATAAAAGGGAGTTCT
Downstream 100 bases:
>100_bases AGCGCATAAAAAAGGCGAACAATGGATCATGAGTTTTTGATTACCATGCGTTTGAGCTTTTCTTTAGCCTTTATTACCAC CCTTATTTTACTCCCTATAG
Product: molybdenum ABC transporter ModA
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKNTFKAFAFLIVFFSSALLAQDLKIAVAANLTHALKALVKEFQKEHPKDAISISFNSSGKLYAQIIQNAPFDLFISADI ARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILKNPKIKRIAMANPKLAPYGKASMEVLDHLKLASSLKSKIVY GASISQAHQFVATKNAQIGFGALSLIDKKDKNLSYFIIDKALYSPIEQALITTKNGANNPLAKVFKDFLFSPKARAIFKE YGYIVD
Sequences:
>Translated_246_residues MKNTFKAFAFLIVFFSSALLAQDLKIAVAANLTHALKALVKEFQKEHPKDAISISFNSSGKLYAQIIQNAPFDLFISADI ARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILKNPKIKRIAMANPKLAPYGKASMEVLDHLKLASSLKSKIVY GASISQAHQFVATKNAQIGFGALSLIDKKDKNLSYFIIDKALYSPIEQALITTKNGANNPLAKVFKDFLFSPKARAIFKE YGYIVD >Mature_246_residues MKNTFKAFAFLIVFFSSALLAQDLKIAVAANLTHALKALVKEFQKEHPKDAISISFNSSGKLYAQIIQNAPFDLFISADI ARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILKNPKIKRIAMANPKLAPYGKASMEVLDHLKLASSLKSKIVY GASISQAHQFVATKNAQIGFGALSLIDKKDKNLSYFIIDKALYSPIEQALITTKNGANNPLAKVFKDFLFSPKARAIFKE YGYIVD
Specific function: Involved in the transport of molybdenum into the cell [H]
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein modA family [H]
Homologues:
Organism=Escherichia coli, GI1786979, Length=241, Percent_Identity=29.4605809128631, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005950 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 27412; Mature: 27412
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTFKAFAFLIVFFSSALLAQDLKIAVAANLTHALKALVKEFQKEHPKDAISISFNSSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KLYAQIIQNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILK HHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCHHHHHC NPKIKRIAMANPKLAPYGKASMEVLDHLKLASSLKSKIVYGASISQAHQFVATKNAQIGF CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCC GALSLIDKKDKNLSYFIIDKALYSPIEQALITTKNGANNPLAKVFKDFLFSPKARAIFKE HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHH YGYIVD CCCCCC >Mature Secondary Structure MKNTFKAFAFLIVFFSSALLAQDLKIAVAANLTHALKALVKEFQKEHPKDAISISFNSSG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC KLYAQIIQNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVLWSENLKMDSLEILK HHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCHHHHHC NPKIKRIAMANPKLAPYGKASMEVLDHLKLASSLKSKIVYGASISQAHQFVATKNAQIGF CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCC GALSLIDKKDKNLSYFIIDKALYSPIEQALITTKNGANNPLAKVFKDFLFSPKARAIFKE HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHH YGYIVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491722 [H]