| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ylxH [H]
Identifier: 188527222
GI number: 188527222
Start: 408811
End: 409695
Strand: Direct
Name: ylxH [H]
Synonym: HPSH_02145
Alternate gene names: 188527222
Gene position: 408811-409695 (Clockwise)
Preceding gene: 188527221
Following gene: 188527223
Centisome position: 25.41
GC content: 39.55
Gene sequence:
>885_bases ATGAACAATCAAGCGAGTCGCTTAGATAATTTGATCAATATTAAAAACCCCAAAAGTTTTTTTGACAATAAAGGGAATAC CAAATTCATCGCTATCACAAGCGGTAAGGGAGGCGTGGGGAAATCCAACATTAGCGCTAATTTAGCTTATGCTTTATACA AGAAAGGTTATAAGGTAGGGGTGTTTGATGCGGATATTGGTTTAGCGAATTTAGATGTTATTTTTGGGGTGAAAACCCAT AAAAATATCTTGCACGCTTTAAAAGGTGAGGCCAAATTGCAAGAAATCATTTGCGAGATTGAGCCCGGGCTTTGTCTTAT TCCTGGGGATAGCGGCGAAGAAATTTTAAAATACATTAGCGGTGCAGAAGCTTTGGATCAATTCGTGGATGAAGAGGGGG TTTTAAGCTCTTTGGATTATATTGTGGTTGATACAGGCGCTGGGATTGGAATCACTACGCAAGCGTTTTTGAACGCGAGC GATTGCGTGGTGATTGTTACCACCCCCGATCCTTCAGCGATTACCGATGCGTATGCATGCATTAAAATCAACTCCAAAAA CAAAGATGAATTGTTTCTTATCGCTAACATGGTAGCCCAACCTAAAGAGGGCAGGGCGACTTATGAAAGGCTGTTGAAAG TGGCTAAAAACAATATCGCTTCATTAGAATTGCATTACTTAGGAGCGATTGAAAACAGCTCCTTATTGAAACGCTATGTG AGAGAGCGCAAAATTTTGAGAAAAATAGCCCCTAATGATTTGTTTTCGCAATCCATTGATCAGATAGCGGGTCTTTTGGT TTCTAAATTAGAAACCGGCGCTTTAGAAATACCAAAAGAAGGTTTTAAAAGCTTTTTTAAAAGGCTTTTGAGTTATTTGG GGTAG
Upstream 100 bases:
>100_bases CTGTTGGACAAGAAGTGCCTATGGATTTGAAAGTGGCCACTAATGAATATTTAGTGGATTGCATGCTAGATGGCTTTAGT AACCCTAATAAGGAACAAGC
Downstream 100 bases:
>100_bases GCTGATGAAAGTGCAAAATTTTATCCATTTTTCTGTTGTGGTAGGGTTTTTTTTAGGGTTAGTGTTTTCGGTGTTGAAAT TCAATGAACCAGAGAGCATT
Product: ATP-binding protein (ylxH)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG
Sequences:
>Translated_294_residues MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG >Mature_294_residues MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVGVFDADIGLANLDVIFGVKTH KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNAS DCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=283, Percent_Identity=26.1484098939929, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32006; Mature: 32006
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVG CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE VFDADIGLANLDVIFGVKTHKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC GAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNASDCVVIVTTPDPSAITDAYAC CHHHHHHHHCCCCHHHHCCEEEEECCCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCEEE IKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNQASRLDNLINIKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYALYKKGYKVG CCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEE VFDADIGLANLDVIFGVKTHKNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYIS EEECCCCEEEEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHC GAEALDQFVDEEGVLSSLDYIVVDTGAGIGITTQAFLNASDCVVIVTTPDPSAITDAYAC CHHHHHHHHCCCCHHHHCCEEEEECCCCCCEEHHHHCCCCCEEEEEECCCCCHHHCCEEE IKINSKNKDELFLIANMVAQPKEGRATYERLLKVAKNNIASLELHYLGAIENSSLLKRYV EEECCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH RERKILRKIAPNDLFSQSIDQIAGLLVSKLETGALEIPKEGFKSFFKRLLSYLG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]