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The map label for this gene is flgH

Identifier: 188527130

GI number: 188527130

Start: 323745

End: 324458

Strand: Direct

Name: flgH

Synonym: HPSH_01685

Alternate gene names: 188527130

Gene position: 323745-324458 (Clockwise)

Preceding gene: 188527128

Following gene: 188527131

Centisome position: 20.13

GC content: 41.46

Gene sequence:

>714_bases
ATGAAAAAAGCGCTTTATTTAGGGGCTGTTGCGTTTAGCGTTGCATTCAGCATGGCATCAGCCAATGAGCCAAAAATTGA
TTTTAACCCTCCTAATTATGTAGAAGAAACCCCCTCTAAAGAATTTATCCCTGAATTGAACAAGTTGGGGAGTTTGTTTG
GGCAGGGTGAGCGCCCTTTATTTGCGGACAGGAGGGCGATGAAGCCTAACGATTTGATCACAATCATTGTTTCTGAAAAA
GCGAGCGCGAATTATTCCAGCTCTAAAGGTTATAAAAGCGCTTCAGGGGGTAATTCCACGCCCCCAAGACTCACTTATAA
CGGGCTAGATGAAAGAAAGAAACAAGAAGCGCAGTATTTAGACGATAAGAATAATTACAATTTCACCAAATCCAGCAATA
ACACGAATTTTAAAGGCGGCGGTTCGCAAAAAAAGAGCGAAGATTTAGAGATCGTGTTGAGCGCTCGAATCATTAAAGTG
CTAGAAAACGGGAATTATTTCATCTATGGGAATAAGGAAGTGCTAGTGGATGGGGAAAAGCAAATCCTTAAGGTGAGTGG
GGTGATCCGCCCTTATGATATTGAAAGGAACAACACCATCCAATCCAAGTTTTTGGCCGACGCTAAGATTGAATACACGA
ATTTAGGGCATTTGAGCGATTCCAATAAAAAGAAATTTGCTGCTGATGCGATGGAAACCCAAATGCCTTATTAA

Upstream 100 bases:

>100_bases
TAAAGATCTAAATTTTACAACAACTTACTCAAAATTAAGCATTTATTCTTTATAAGAGAGTATAATTCAAAGTTTAAAAT
AACTCAAATAAGGCTAATGG

Downstream 100 bases:

>100_bases
AAAGAGCAAAGCCTAGCATGAGAGCGATCGCTATTGTTTTAGCTAGAAGTTCCAGTAAAAGGATCAAGAATAAAAATATC
ATTGATTTTTTCAATAAACC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKGYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Sequences:

>Translated_237_residues
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKGYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
>Mature_237_residues
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPLFADRRAMKPNDLITIIVSEK
ASANYSSSKGYKSASGGNSTPPRLTYNGLDERKKQEAQYLDDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKV
LENGNYFIYGNKEVLVDGEKQILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=175, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 26410; Mature: 26410

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPL
CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FADRRAMKPNDLITIIVSEKASANYSSSKGYKSASGGNSTPPRLTYNGLDERKKQEAQYL
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
DDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEK
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCH
QILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
HEEEECCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKALYLGAVAFSVAFSMASANEPKIDFNPPNYVEETPSKEFIPELNKLGSLFGQGERPL
CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FADRRAMKPNDLITIIVSEKASANYSSSKGYKSASGGNSTPPRLTYNGLDERKKQEAQYL
HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHC
DDKNNYNFTKSSNNTNFKGGGSQKKSEDLEIVLSARIIKVLENGNYFIYGNKEVLVDGEK
CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEECCCH
QILKVSGVIRPYDIERNNTIQSKFLADAKIEYTNLGHLSDSNKKKFAADAMETQMPY
HEEEECCCCCCEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]