Click here to switch to the map view.

The map label for this gene is 188527128

Identifier: 188527128

GI number: 188527128

Start: 322329

End: 322871

Strand: Direct

Name: 188527128

Synonym: HPSH_01675

Alternate gene names: NA

Gene position: 322329-322871 (Clockwise)

Preceding gene: 188527121

Following gene: 188527130

Centisome position: 20.04

GC content: 38.12

Gene sequence:

>543_bases
ATGTTAAACAAGTTTAAAAAAATCGTTGGCGTGGGTGTGTTAGTGGGCTGTTTAGGGGTTTTGCAAGCCAAAAACAGCTT
ATTTGTCTTACCTTATGAGCAAAAAGACGCTCTCAATTCTTTAGTTTCTAGCATTAGTAACGCCAGAGAGAGCGTGAAAA
TCGCTATCTATAGTTTCACGCACAGAGATATTGCAAGAGCGATTAAAAGCGTAGCGAGTAGGGGGATTAAGGTGCAAATC
ATTTATGATTATGAAAGCAATCATAATAACAAGCAATCCACTATCGGCTATTTGGACAAATACCCTAACACTAAAGTGTG
CTTATTGAAAGGGCTTAAGGCTAAAAACGGGAATTATTACGGCATCATGCACCAAAAAGTAGCGATCATTGATGATAAGA
TCGTGTTTTTAGGCTCAGCGAATTGGAGCAAAAACGCTTTTGAAAACAATTACGAAGTGCTTTTAAAAACCGATGACACA
GAAACGATTCTCAAAGCCAAGAGTTACTACCAAAAGATGTTAGGAAGTTGCGTTGGGTTTTAA

Upstream 100 bases:

>100_bases
TATCAATTTTTATCGCTTTTTTTAAATCTTTTATTATAATCAAAAATCCACTTGGTTGGTTGTTTTTATCATGAGTGTAA
TTTAAAATAAGGATCATTTG

Downstream 100 bases:

>100_bases
AGCCCTTTAGAAGTGATAATTATACCCCACATAAAAGGCAAAGACCCTACGCATTTGAACCTTGAGCGCGTCAGTGGTGT
AGTATTTGTTATTAATGGTG

Product: nuclease NucT

Products: NA

Alternate protein names: Nuclease NucT; Phospholipase D Family Protein; Endonuclease; Edta-Resistant Nuclease

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLNKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSSISNARESVKIAIYSFTHRDIARAIKSVASRGIKVQI
IYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYYGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDT
ETILKAKSYYQKMLGSCVGF

Sequences:

>Translated_180_residues
MLNKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSSISNARESVKIAIYSFTHRDIARAIKSVASRGIKVQI
IYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYYGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDT
ETILKAKSYYQKMLGSCVGF
>Mature_180_residues
MLNKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSSISNARESVKIAIYSFTHRDIARAIKSVASRGIKVQI
IYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYYGIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDT
ETILKAKSYYQKMLGSCVGF

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI270265812, Length=110, Percent_Identity=30, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20128; Mature: 20128

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSSISNARESVKIAIYSFT
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEC
HRDIARAIKSVASRGIKVQIIYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYY
HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEE
GIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDTETILKAKSYYQKMLGSCVGF
EEEEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKFKKIVGVGVLVGCLGVLQAKNSLFVLPYEQKDALNSLVSSISNARESVKIAIYSFT
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEEEEC
HRDIARAIKSVASRGIKVQIIYDYESNHNNKQSTIGYLDKYPNTKVCLLKGLKAKNGNYY
HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEE
GIMHQKVAIIDDKIVFLGSANWSKNAFENNYEVLLKTDDTETILKAKSYYQKMLGSCVGF
EEEEEEEEEECCEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA