Click here to switch to the map view.

The map label for this gene is 188527079

Identifier: 188527079

GI number: 188527079

Start: 267096

End: 267635

Strand: Direct

Name: 188527079

Synonym: HPSH_01420

Alternate gene names: NA

Gene position: 267096-267635 (Clockwise)

Preceding gene: 188527078

Following gene: 188527080

Centisome position: 16.6

GC content: 35.19

Gene sequence:

>540_bases
ATGAAGCCATTGCATTTTTCACACCTAGACAGAGAGCAATCAGGCGATGTGGGGTTTATCATTAAAAACCTCGTTTTTTT
AGGGGTTTTTTCCTTATTTGGTTGGTTGAATACCGAGTATTTTCTATGGCCTAGCATGCTGGAATTGAAAAAAATCCTTT
TAGAAGAAAATCGTAAAAAAAGCGTTTTAGAATACGCGCAAAGGCATTTTGAAACAGCTCTAACCAATTACCGCAATCAA
AAAGAAACAGGCGAATCCTTATTAAAGATCTTTAACGATGAAGAGTCTAGGCGGATTTTAGAAAAGATTTTAAAAAAATG
TTTTGATGCCTATAAAATCAAACTCCTGCTCTCTCAAAAACCCTTTCAAAAAACCCAATTTTTTATCATGGCCAGAGCGA
GCGAATTAGAAAAAACTTATCTTTTTTTCACCTTAATCAACAAGTATTTACCGAGCGCTCAAAGCCAATTGCCTTTAAAA
ATCTCTAAAGATGATGAAGGGTTGTTGGTGCAATTTAGCGTGAGTATTGATCTCCAATAG

Upstream 100 bases:

>100_bases
ATTCTAGGGCGGAATTTTTCCCCTTAAGCGACGGGTGGTTTAATTTTGTTTCCACCAACTTTTCTAATTCCTTATTGATA
AAAAACCCGGAGTCTATTAA

Downstream 100 bases:

>100_bases
GATAGGGGTAGTTTAATGCAAGATTTTGATTTTAGTTTTAATTATAAGGCATGCGAGGGTTGTGGGGCAAAGTGTTGCGT
GGGGGAAAGCGGGTATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKPLHFSHLDREQSGDVGFIIKNLVFLGVFSLFGWLNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALTNYRNQ
KETGESLLKIFNDEESRRILEKILKKCFDAYKIKLLLSQKPFQKTQFFIMARASELEKTYLFFTLINKYLPSAQSQLPLK
ISKDDEGLLVQFSVSIDLQ

Sequences:

>Translated_179_residues
MKPLHFSHLDREQSGDVGFIIKNLVFLGVFSLFGWLNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALTNYRNQ
KETGESLLKIFNDEESRRILEKILKKCFDAYKIKLLLSQKPFQKTQFFIMARASELEKTYLFFTLINKYLPSAQSQLPLK
ISKDDEGLLVQFSVSIDLQ
>Mature_179_residues
MKPLHFSHLDREQSGDVGFIIKNLVFLGVFSLFGWLNTEYFLWPSMLELKKILLEENRKKSVLEYAQRHFETALTNYRNQ
KETGESLLKIFNDEESRRILEKILKKCFDAYKIKLLLSQKPFQKTQFFIMARASELEKTYLFFTLINKYLPSAQSQLPLK
ISKDDEGLLVQFSVSIDLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21139; Mature: 21139

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLHFSHLDREQSGDVGFIIKNLVFLGVFSLFGWLNTEYFLWPSMLELKKILLEENRKK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHH
SVLEYAQRHFETALTNYRNQKETGESLLKIFNDEESRRILEKILKKCFDAYKIKLLLSQK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PFQKTQFFIMARASELEKTYLFFTLINKYLPSAQSQLPLKISKDDEGLLVQFSVSIDLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKPLHFSHLDREQSGDVGFIIKNLVFLGVFSLFGWLNTEYFLWPSMLELKKILLEENRKK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHCCCHH
SVLEYAQRHFETALTNYRNQKETGESLLKIFNDEESRRILEKILKKCFDAYKIKLLLSQK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PFQKTQFFIMARASELEKTYLFFTLINKYLPSAQSQLPLKISKDDEGLLVQFSVSIDLQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA