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The map label for this gene is 188527076

Identifier: 188527076

GI number: 188527076

Start: 264950

End: 265603

Strand: Direct

Name: 188527076

Synonym: HPSH_01405

Alternate gene names: NA

Gene position: 264950-265603 (Clockwise)

Preceding gene: 188527075

Following gene: 188527077

Centisome position: 16.47

GC content: 41.44

Gene sequence:

>654_bases
TTGAGTTTAAAATTTTTCAGGAAAAATATCGTTTTAAAGGTTGTTCCACGCTTGGCGTTTGGAGTCCTTTGGTTGTTGCA
TAAAACTTGTAAAAACCGCTATTTTTTAGCTCAAAATTTAAAAGAAAAACCCTTTATTGTAAGCTGTTGGCATGGGGAGC
TTGGCATGATCGGGTTTGCGTATTTAAGGCTTCAAAAACCTTCTATTTATGTGATTGCAAGCCAGCATTTTGACGGCTCT
ATTGCGGCGGGTTTGTTTGAAAGCTTTGGTTTTAAAAACATTAGAGGCTCTAGCAAAAAAGGGGGGGTTAAGGTTTTGAT
AGAAGGGCTTAAGCGTTTGAAAGAAGGTTGCGATGTCGCTATCACTCCTGATGGCCCCAAAGGCCCACGACACAGCATAG
CGGATGGGGTGATCGCTTTGGCTCAAAAATCAGGCGTGGGGATTAGCGCTTGTCGGGTGGTTTGTAAAAACGCATGGCGA
TTGAACACTTGGGATCAATTTGAAATCCCTAAGCCTTTTAGCGAAGTGCATTATTACATGCTAGAATCTGTAATCATCCC
TAAAGAATGGGAGCTTTCAAAGGCTAAAGAATATTTAAAGACGCGCATGGATTCTGTTGGATTTGAAGAATCTCAAAGGG
GTTTGGGTGCTTAA

Upstream 100 bases:

>100_bases
AAGAGTGGAGATTGTTTCTCATTCCAAAGGGCGCTTGATAGCGACCGCTAAAGGCGACTAATAAAAATAACCAATGAAAA
AGCGGGTTTAAAGGCGAGAA

Downstream 100 bases:

>100_bases
GGGGTTAAAAAAAGTGCTTAAAGAGAGGTTTTGCTCTCAAGTGTATATCTCTTTTAATGTGGATCACAATCTTTTATCCG
CTCAAATTTTAAGGGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLQKPSIYVIASQHFDGS
IAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWR
LNTWDQFEIPKPFSEVHYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA

Sequences:

>Translated_217_residues
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLQKPSIYVIASQHFDGS
IAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWR
LNTWDQFEIPKPFSEVHYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA
>Mature_216_residues
SLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFAYLRLQKPSIYVIASQHFDGSI
AAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRL
NTWDQFEIPKPFSEVHYYMLESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 24396; Mature: 24265

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCHHHHHHH
YLRLQKPSIYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVA
HEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVHYYM
ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC
>Mature Secondary Structure 
SLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQNLKEKPFIVSCWHGELGMIGFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCEEEECCCCHHHHHHH
YLRLQKPSIYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVA
HEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVHYYM
ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
LESVIIPKEWELSKAKEYLKTRMDSVGFEESQRGLGA
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]