Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527077

Identifier: 188527077

GI number: 188527077

Start: 265596

End: 266576

Strand: Direct

Name: 188527077

Synonym: HPSH_01410

Alternate gene names: NA

Gene position: 265596-266576 (Clockwise)

Preceding gene: 188527076

Following gene: 188527078

Centisome position: 16.51

GC content: 35.78

Gene sequence:

>981_bases
GTGCTTAAGGGGTTAAAAAAAGTGCTTAAAGAGAGGTTTTGCTCTCAAGTGTATATCTCTTTTAATGTGGATCACAATCT
TTTATCCGCTCAAATTTTAAGGGTTAAAAACCATCGCATTAAAGAGAAATTTTTTAAAACTTTTGAGACTAAAGTGGAGA
TTAAAAGCGGTGAAGTCCCCATTCAAGCCTTAAAAATCGCCAGAACTTATAGCCAAAAATACCCCTACACTTATTTTAGC
GCGATGAGTAAAGCTAAAGAGGTTTTATGCGAAAAGCAGGCGTTTGAACAAATCAAACGAGAAAATCAAGATTATCAGGC
TTGTGCAATCAACCAAAAGTATTGCGTTTATGTGGAATCTAAGGATTTTTTAAAGGATTTCAAGCGTTTTAAAATCCAGG
ATGTGGATTTTTTGTTTTCGCCTTTTAGCCTTATTTATGATTTTGTGCGCGATAATTTAGAAGAAAAGCCGTTGTTGTAT
TTGCTTTTGGAGCGTTCAAGATTTTATTTTTTGATTGCGGATAAAAAAGAGATTTTTTTAGCCAAATCCGTGTTTTTAGA
AGAGCAACCTGAAGAGTTTATAGAGAGCAAGGAAGAGGACTCTATGGAGATGGATAATGAGGCTGTGAATTTGTTTTTGA
GTGAAATCCAAGAAGATATTGACAGCCTTGAAGAAGCGATAGGCCTAGATAGCAGTAAGGATAATAGCGAAAAAAATGAG
GACGCTTATAGTTTGATTGAAGGCATGACAAATATCCCTTTGATTGCAAACGCCTTGCAAGAGGGATTGCACAGCGTCTA
TCATTCTAGGGATATAGACTTTGTAGAAAAAGTGGTTGTTTTAGACAGCTGTCAAATCCACCAAAAAGCGTTAATGCATT
TGCAAGAAACTTTGATGATAGAAGTGGATAGGCTTGATTTTTCTTTAGTGGAGCGCTTGAATATTTTAGCGTGCATGGAG
AATGAAAATTATGCGTTTTAG

Upstream 100 bases:

>100_bases
TCTGTAATCATCCCTAAAGAATGGGAGCTTTCAAAGGCTAAAGAATATTTAAAGACGCGCATGGATTCTGTTGGATTTGA
AGAATCTCAAAGGGGTTTGG

Downstream 100 bases:

>100_bases
CTACATTGAGCCAAGAGCGAAATACCTTATTAGCAAGCTTTCTAAAATTTGGGTTTTTTACATTTTTTTATCTTTTGTGG
TAATAGGGGGGCTAGTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLKGLKKVLKERFCSQVYISFNVDHNLLSAQILRVKNHRIKEKFFKTFETKVEIKSGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKRENQDYQACAINQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLEEKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKNE
DAYSLIEGMTNIPLIANALQEGLHSVYHSRDIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILACME
NENYAF

Sequences:

>Translated_326_residues
MLKGLKKVLKERFCSQVYISFNVDHNLLSAQILRVKNHRIKEKFFKTFETKVEIKSGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKRENQDYQACAINQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLEEKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKNE
DAYSLIEGMTNIPLIANALQEGLHSVYHSRDIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILACME
NENYAF
>Mature_326_residues
MLKGLKKVLKERFCSQVYISFNVDHNLLSAQILRVKNHRIKEKFFKTFETKVEIKSGEVPIQALKIARTYSQKYPYTYFS
AMSKAKEVLCEKQAFEQIKRENQDYQACAINQKYCVYVESKDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLEEKPLLY
LLLERSRFYFLIADKKEIFLAKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKNE
DAYSLIEGMTNIPLIANALQEGLHSVYHSRDIDFVEKVVVLDSCQIHQKALMHLQETLMIEVDRLDFSLVERLNILACME
NENYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38357; Mature: 38357

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGLKKVLKERFCSQVYISFNVDHNLLSAQILRVKNHRIKEKFFKTFETKVEIKSGEVP
CCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
IQALKIARTYSQKYPYTYFSAMSKAKEVLCEKQAFEQIKRENQDYQACAINQKYCVYVES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECC
KDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLEEKPLLYLLLERSRFYFLIADKKEIFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHH
AKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKNE
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
DAYSLIEGMTNIPLIANALQEGLHSVYHSRDIDFVEKVVVLDSCQIHQKALMHLQETLMI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVDRLDFSLVERLNILACMENENYAF
HHHHCCHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MLKGLKKVLKERFCSQVYISFNVDHNLLSAQILRVKNHRIKEKFFKTFETKVEIKSGEVP
CCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
IQALKIARTYSQKYPYTYFSAMSKAKEVLCEKQAFEQIKRENQDYQACAINQKYCVYVES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECC
KDFLKDFKRFKIQDVDFLFSPFSLIYDFVRDNLEEKPLLYLLLERSRFYFLIADKKEIFL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCHHHHH
AKSVFLEEQPEEFIESKEEDSMEMDNEAVNLFLSEIQEDIDSLEEAIGLDSSKDNSEKNE
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
DAYSLIEGMTNIPLIANALQEGLHSVYHSRDIDFVEKVVVLDSCQIHQKALMHLQETLMI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVDRLDFSLVERLNILACMENENYAF
HHHHCCHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA