| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is purA [H]
Identifier: 188527062
GI number: 188527062
Start: 249430
End: 250665
Strand: Direct
Name: purA [H]
Synonym: HPSH_01325
Alternate gene names: 188527062
Gene position: 249430-250665 (Clockwise)
Preceding gene: 188527061
Following gene: 188527063
Centisome position: 15.51
GC content: 44.5
Gene sequence:
>1236_bases ATGGCAGATGTCGTTGTGGGGATCCAGTGGGGAGATGAGGGGAAAGGAAAAATTGTTGATAGGATCGCTAAAGATTATGA CTTTGTGGTGCGCTATCAAGGCGGGCATAATGCCGGGCATACCATTGTGCATAAGGGGGTTAAGCATTCTTTGCATTTAA TGCCCTCAGGGGTTTTATACCCACAATGCAAGAACATCATTTCTAGCGCGGTGGTCGTGAGCATTAAGGATTTGTGCGAA GAAATCAGCGCGTTTGAGGATTTAGAAAATCGTTTGTTCATCAGCGACAGAGCCCATGTGATCTTGCCTTATCATGCCAA AAAAGACGCTTTTAAAGAAAAATCTCAAAACATCGGCACGACTAAAAAAGGCATAGGCCCTTGCTATGAGGATAAAATGG CAAGGAGCGGGATAAGAATGGGGGATTTATTAGACGATAAGATCTTAGAAGAAAGGCTAAACGCTCATTTCAAAGCCATT GAGCCTTTTAAGGAAGCGTATGATTTGGGCGAGAATTACGAAAAAGATTTGAGAGAGTATTTTAAAACTCATGCTCCAAA AATCTGCCCCTTTATCAAAGACACGACAAGCATGCTGATAGAAGCGAACCAAAAGGGTGAAAAAATCCTACTAGAAGGGG CGCAAGGCACGCTTTTAGACATTGATTTAGGGACTTACCCTTTTGTAACAAGCTCTAACACCACGAGCGCTAGCGCATGC GTGAGCACCGGCTTAAACCCTAAAGCGATCAATGAAGTGATAGGCATCACGAAAGCCTACTCCACTCGTGTGGGTAATGG GCCTTTCCCTAGCGAAGACACTACACCCATGGGCGATCATTTAAGGACTAAGGGCGCGGAGTTTGGCACGACAACCAAGC GCCCACGGCGTTGCGGGTGGCTGGATTTGGTGGCTTTAAAATACGCTTGCACTTTGAATGGTTGCACGCAATTAGCTTTA ATGAAATTAGATGTTTTAGACGGGATTGATGCGATTAAGGTGTGCGTGGCTTATGAAAGAAAGGGCGAAAGATTAGAGGC TTTCCCTAGCGATCTGAAAGATTGCGCACCGATCTATCAAACTTTTAAAGGCTGGGAAAAAAGCGCGGGCGTGAGAAAAT TAGACGATTTAGAGCCAAACGCTAGAGAGTATATCCGCTTTATTGAAAAAGAAGTGGGGGTAAAAATCCGCCTTATTTCT ACAAGCCCTGAAAGAGAAGACACGATTTTTCTATGA
Upstream 100 bases:
>100_bases AAGCTCTTTTTAGGGCTTATAAAGAGGCTTTTTACTTTTTTTTGGTATTCTAACAAGCTTTTAAACAATCCAATCTACTT TGTTTTAAGGATAATATTTT
Downstream 100 bases:
>100_bases AAAAATTCGCTTCTGTATTGGTGCAATTAAAAACCCTTGCGTTAGAAAAAATAGAACAAAAGCTTGAAAGCAAGCGTTTA GAATGGCAGCAAAATGAGCG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPQCKNIISSAVVVSIKDLCE EISAFEDLENRLFISDRAHVILPYHAKKDAFKEKSQNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEERLNAHFKAI EPFKEAYDLGENYEKDLREYFKTHAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASAC VSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGAEFGTTTKRPRRCGWLDLVALKYACTLNGCTQLAL MKLDVLDGIDAIKVCVAYERKGERLEAFPSDLKDCAPIYQTFKGWEKSAGVRKLDDLEPNAREYIRFIEKEVGVKIRLIS TSPEREDTIFL
Sequences:
>Translated_411_residues MADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPQCKNIISSAVVVSIKDLCE EISAFEDLENRLFISDRAHVILPYHAKKDAFKEKSQNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEERLNAHFKAI EPFKEAYDLGENYEKDLREYFKTHAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASAC VSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGAEFGTTTKRPRRCGWLDLVALKYACTLNGCTQLAL MKLDVLDGIDAIKVCVAYERKGERLEAFPSDLKDCAPIYQTFKGWEKSAGVRKLDDLEPNAREYIRFIEKEVGVKIRLIS TSPEREDTIFL >Mature_410_residues ADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLYPQCKNIISSAVVVSIKDLCEE ISAFEDLENRLFISDRAHVILPYHAKKDAFKEKSQNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEERLNAHFKAIE PFKEAYDLGENYEKDLREYFKTHAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASACV STGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGAEFGTTTKRPRRCGWLDLVALKYACTLNGCTQLALM KLDVLDGIDAIKVCVAYERKGERLEAFPSDLKDCAPIYQTFKGWEKSAGVRKLDDLEPNAREYIRFIEKEVGVKIRLIST SPEREDTIFL
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=43.6619718309859, Blast_Score=347, Evalue=9e-96, Organism=Homo sapiens, GI34577063, Length=430, Percent_Identity=45.1162790697674, Blast_Score=347, Evalue=1e-95, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=42.0654911838791, Blast_Score=306, Evalue=3e-83, Organism=Escherichia coli, GI1790620, Length=426, Percent_Identity=46.0093896713615, Blast_Score=350, Evalue=8e-98, Organism=Caenorhabditis elegans, GI25146553, Length=424, Percent_Identity=42.2169811320755, Blast_Score=330, Evalue=6e-91, Organism=Caenorhabditis elegans, GI25146555, Length=424, Percent_Identity=42.2169811320755, Blast_Score=330, Evalue=7e-91, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=42.1911421911422, Blast_Score=355, Evalue=7e-99, Organism=Drosophila melanogaster, GI21356033, Length=423, Percent_Identity=45.1536643026005, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 45775; Mature: 45644
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLY CCCEEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC PQCKNIISSAVVVSIKDLCEEISAFEDLENRLFISDRAHVILPYHAKKDAFKEKSQNIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEECCCHHHHHHHHHCCCC TKKGIGPCYEDKMARSGIRMGDLLDDKILEERLNAHFKAIEPFKEAYDLGENYEKDLREY CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FKTHAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASAC HHHCCCCCCCHHHHHHHHHEECCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCHHHH VSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGAEFGTTTKRPRRCGW HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCH LDLVALKYACTLNGCTQLALMKLDVLDGIDAIKVCVAYERKGERLEAFPSDLKDCAPIYQ HHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH TFKGWEKSAGVRKLDDLEPNAREYIRFIEKEVGVKIRLISTSPEREDTIFL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCC >Mature Secondary Structure ADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIVHKGVKHSLHLMPSGVLY CCEEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC PQCKNIISSAVVVSIKDLCEEISAFEDLENRLFISDRAHVILPYHAKKDAFKEKSQNIGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEECCCHHHHHHHHHCCCC TKKGIGPCYEDKMARSGIRMGDLLDDKILEERLNAHFKAIEPFKEAYDLGENYEKDLREY CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FKTHAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASAC HHHCCCCCCCHHHHHHHHHEECCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCHHHH VSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGAEFGTTTKRPRRCGW HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCH LDLVALKYACTLNGCTQLALMKLDVLDGIDAIKVCVAYERKGERLEAFPSDLKDCAPIYQ HHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH TFKGWEKSAGVRKLDDLEPNAREYIRFIEKEVGVKIRLISTSPEREDTIFL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA