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The map label for this gene is 188527038

Identifier: 188527038

GI number: 188527038

Start: 227023

End: 227676

Strand: Direct

Name: 188527038

Synonym: HPSH_01205

Alternate gene names: NA

Gene position: 227023-227676 (Clockwise)

Preceding gene: 188527037

Following gene: 188527039

Centisome position: 14.11

GC content: 46.02

Gene sequence:

>654_bases
ATGAAAAAACCCTACAGAAAGATTTCTGATTATGCGATCGTGGGTGGTTTGAGCGCGTTAGTGATGGTAAGCATTGTGGG
GTGTAAGAGCAATGCCGATGACAAACCAAAAGAGCAAAGTTCTCTGAGTCAAAGCGTTCAAAAAGGCGCGTTTGTGATTT
TAGAAGAGCAAAAGGATAAATCTTACAAGGTTGTTGAAGAATACCCCAGTTCAAGAACCCACATTGTAGTGCGCGATTTG
CAAGGCAATGAACGCGTGTTAAGCAATGAAGAGATTCAAAAGCTCATCAAAGAAGAAGAAGCCAAAATTGATAACGGCAC
GAGCAAGCTTATCCAGCCTAATAATGGAGGTGGAGGGAGTAATGAAAGCTCAGGCTTTGGCTTGGGGAGCGCGATTTTAG
GGAGTGCGGCGGGGGCGATTTTAGGGAGCTATATTGGCAATAAGCTTTTCAATAACCCTAATTATCAGCAAAACGCCCAA
CGGACCTACAAATCCCCACAAGCTTACCAACGCTCTCAAAATTCCTTTTCTAAAAGCGCGCCCAGCGCTTCAAGCATGGG
CGGAGCGAGTAAGGGACAGAGCGGGTTTTTTGGCTCTAGTAGGCCTACTAGTTCGCCTGCGGTAAGCTCTGGGACAAGGG
GCTTTAACTCATAA

Upstream 100 bases:

>100_bases
CACTAAAGTGGAAAATACCACTAAAAAGATTTTTGAATCTGGCGTGATTAAGGGTGTGCCTTTCTTATACCATTATAAGG
CATGATATAAGGCTACTCTC

Downstream 100 bases:

>100_bases
TTTAATCTATTTTAAGGCTAAAAAATGCAAGTGATTCCTTTAAAACCTTTAGACAATAAGACCTTAGAAGAAATCGGCTT
AGATTGGCACACTAATGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSNEEIQKLIKEEEAKIDNGTSKLIQPNNGGGGSNESSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQ
RTYKSPQAYQRSQNSFSKSAPSASSMGGASKGQSGFFGSSRPTSSPAVSSGTRGFNS

Sequences:

>Translated_217_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSNEEIQKLIKEEEAKIDNGTSKLIQPNNGGGGSNESSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQ
RTYKSPQAYQRSQNSFSKSAPSASSMGGASKGQSGFFGSSRPTSSPAVSSGTRGFNS
>Mature_217_residues
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDKSYKVVEEYPSSRTHIVVRDL
QGNERVLSNEEIQKLIKEEEAKIDNGTSKLIQPNNGGGGSNESSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQ
RTYKSPQAYQRSQNSFSKSAPSASSMGGASKGQSGFFGSSRPTSSPAVSSGTRGFNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0323 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1205_HELPS (B2US63)

Other databases:

- EMBL:   CP001072
- RefSeq:   YP_001909725.1
- GeneID:   6296120
- GenomeReviews:   CP001072_GR
- KEGG:   hps:HPSH_01205
- HOGENOM:   HBG320656
- OMA:   YKSPQAY
- ProtClustDB:   PRK04081
- HAMAP:   MF_01421
- InterPro:   IPR020913

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23031; Mature: 23031

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SYKVVEEYPSSRTHIVVRDLQGNERVLSNEEIQKLIKEEEAKIDNGTSKLIQPNNGGGGS
CHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCC
NESSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQRTYKSPQAYQRSQNSFSKSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PSASSMGGASKGQSGFFGSSRPTSSPAVSSGTRGFNS
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKPYRKISDYAIVGGLSALVMVSIVGCKSNADDKPKEQSSLSQSVQKGAFVILEEQKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCC
SYKVVEEYPSSRTHIVVRDLQGNERVLSNEEIQKLIKEEEAKIDNGTSKLIQPNNGGGGS
CHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCC
NESSGFGLGSAILGSAAGAILGSYIGNKLFNNPNYQQNAQRTYKSPQAYQRSQNSFSKSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PSASSMGGASKGQSGFFGSSRPTSSPAVSSGTRGFNS
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA