Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527037

Identifier: 188527037

GI number: 188527037

Start: 226210

End: 227007

Strand: Direct

Name: 188527037

Synonym: HPSH_01200

Alternate gene names: NA

Gene position: 226210-227007 (Clockwise)

Preceding gene: 188527034

Following gene: 188527038

Centisome position: 14.06

GC content: 39.22

Gene sequence:

>798_bases
ATGATATTAAGAGCGAGTGTGTTGAGCGCGTTACTTCTTGTAGGCTTAGGGGCAGCCCCTAAACATTCAGTTTCAGCTAA
TGACAAACGGATGCAGGATAATTTAGTGAGCGTGATTGAAAAACAAACCAATAAAAAGGTGCGTATTTTAGAAATCAAAC
CTTTAAAATCCAGCCAGGATTTAAAAATAGTCGTTATTGAAGATCCGGACACTAAATACAATATTCCGCTTGTAGTGAGT
AAGGATGGTAATTTAATCATAGGGCTTAGCAATATCTTTTTTAGCAATAAAAGCGATGATGTGCAATTAGTCGCAGAAAC
CAATCAAAAAGTCCAAGCCCTTAACGCTACCCAACAAAATAGCGCGAAATTGAACGCTATTTTTAATGAAATACCGGCTG
ATTATGCGATAGAGTTGCCCTCTACTAACGCTGAAAATAAGGATAAAATCCTTTATATTGTTTCTGATCCCATGTGCCCG
CATTGCCAAAAAGAGCTCACTAAACTCAGGGATCACTTGAAAGAAAACACCGTGAGAATGGTTGTAGTGGGGTGGCTTGG
GGTCAATTCGGCTAAAAAAGCGGCTTTGATCCAAGAAGAAATGGCGAAAGCTAGGGCTAGGGGAGCGAGCGTGGAAGATA
AAATCTCTATCCTTGAAAAGATTTATTCCACCCAATACGATATTAACGCTCAAAAAGAGCCTGAAGATTTACGCACTAAA
GTGGAAAATACCACTAAAAAGATTTTTGAATCTGGCGTGATTAAGGGTGTGCCTTTCTTATACCATTATAAGGCATGA

Upstream 100 bases:

>100_bases
TTAAGCCTTATGAAAATAGGGGATTTTTATGGTATTATACCCATTAAAAGCTTATCCCTTTTATTGTAAGGGTTTAGGCT
ATTGAACTTTAGGAGTTTTA

Downstream 100 bases:

>100_bases
TATAAGGCTACTCTCATGAAAAAACCCTACAGAAAGATTTCTGATTATGCGATCGTGGGTGGTTTGAGCGCGTTAGTGAT
GGTAAGCATTGTGGGGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein Disulphide Isomerase; Protein Disulfide Isomerase; Protein-Disulfide Isomerase

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKIVVIEDPDTKYNIPLVVS
KDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCP
HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK
VENTTKKIFESGVIKGVPFLYHYKA

Sequences:

>Translated_265_residues
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKIVVIEDPDTKYNIPLVVS
KDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCP
HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK
VENTTKKIFESGVIKGVPFLYHYKA
>Mature_265_residues
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQDLKIVVIEDPDTKYNIPLVVS
KDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQNSAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCP
HCQKELTKLRDHLKENTVRMVVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK
VENTTKKIFESGVIKGVPFLYHYKA

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29499; Mature: 29499

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQD
CEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
LKIVVIEDPDTKYNIPLVVSKDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQN
EEEEEEECCCCCCCCEEEEECCCCEEEEEHHEEECCCCCCEEEEECCCCHHHHHCCCCCC
SAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCPHCQKELTKLRDHLKENTVRM
CHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
VVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VENTTKKIFESGVIKGVPFLYHYKA
HHHHHHHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MILRASVLSALLLVGLGAAPKHSVSANDKRMQDNLVSVIEKQTNKKVRILEIKPLKSSQD
CEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
LKIVVIEDPDTKYNIPLVVSKDGNLIIGLSNIFFSNKSDDVQLVAETNQKVQALNATQQN
EEEEEEECCCCCCCCEEEEECCCCEEEEEHHEEECCCCCCEEEEECCCCHHHHHCCCCCC
SAKLNAIFNEIPADYAIELPSTNAENKDKILYIVSDPMCPHCQKELTKLRDHLKENTVRM
CHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
VVVGWLGVNSAKKAALIQEEMAKARARGASVEDKISILEKIYSTQYDINAQKEPEDLRTK
EEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VENTTKKIFESGVIKGVPFLYHYKA
HHHHHHHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA