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The map label for this gene is 187928927

Identifier: 187928927

GI number: 187928927

Start: 1934987

End: 1935835

Strand: Reverse

Name: 187928927

Synonym: Rpic_1846

Alternate gene names: NA

Gene position: 1935835-1934987 (Counterclockwise)

Preceding gene: 187928928

Following gene: 187928926

Centisome position: 49.1

GC content: 62.31

Gene sequence:

>849_bases
GTGATTCGTCGCTCCAAACCGCTATTGGGGACTTTCGTTGAAGTTCGCATTGACGATGTGTATCCCCAGGACTGCGCTCA
CTTGGCAGAAACCGCCATCGCAGCGGCGTTCTCCGTAATCGAGCAAGCCGAGGCGTTGATGAGCTTCCAGCGCTCGGATA
GCGACTTGTCACGTCTGCATGCGGCGTCGGTAGGCGAAGCGGTCCGCGTTCACCCTTGGACCATGCGTGTGCTGCGCGAG
GCCCAGCGCATGCACGAGCGTACCGGCGGCGTGTTCGACCCCACCGTGGCCCGCATGTTGGTGGCACACAAAATTTTGCC
CCGCCCAGCGGGGCCGACGGCGGAAGTCGACGTGCGGTTTGCGGATGTAGTGATGCTCGATGAAAATCGCATTAGTAAGC
GGCGCGCACTATGGTTGGATCTCGGTGGCATCGCCAAAGGCTTTGCCGTGGACATGGCTATCCTAAGTCTGCGGCGCCAC
AACGTTCGCAGTGGCGCCGTTTCGGCCGGAGGGGACCTGCGCGTCTTTGGCAAGCATGCACAGCCCATCCACGTACGCAG
TGCCAACGCGCCCGGTCGGCTAGAACTACTCGGTCGGCTCACCAACGGGGCCGTGGCCACCAGCGGTCACTATTTCGCAG
AAAGCTTCGGACTGCCCCCTGGTACAGCATCCATCCGGTCGCAACAAGCGCCGATGGAAGCGCCTTGCGCAGAGCGAACG
GTCACCGTCATTGCCCCCCGCTGTATCTGGGCGGACGCACTGACCAAGGTCGCCATGCTTGCCGGTACGACGGCGCCCGC
CACGGTCCGCGCGCTATCAAGCTATCACGCACACGTTGTTGCATCATGA

Upstream 100 bases:

>100_bases
AAGACATCCGTAACATCAGTGGCGCGACGCTCTCATGCAAACACATCACCCAGGGAGTCAAGCGGGTGCTGGCTGTGTAT
GACCTCTTACTAGCCAAGAT

Downstream 100 bases:

>100_bases
CGCAATCCTCGCATCGACATCCCCTGAAAGGGACAGGCATTCGTCTGCATCCGTATCACTATTGGGTTGCTCTCGCCGTA
TTGCTAGCGGTAGCGGTGTC

Product: ApbE family lipoprotein

Products: NA

Alternate protein names: ApbE Family Protein; Thiamine Biosynthesis Lipoprotein ApbE; Thiamine Biosynthesis Lipoprotein; ApbE-Like Lipoprotein; Apbe Family Lipoprotein; Iron-Sulfur Cluster Assembly/Repair Protein ApbE; Thiamine Biosynthesis Lipoprotein ApbE Transmembrane; Thiamine Biosynthesis Lipoprotein APBE Transmembrane; ApbE Family; Thaimine Biosynthesis Protein; Abpe Family Protein; Thiamin Biosynthesis Lipoprotein ApbE; Thiamine Biosynthesis APBE Transmembrane Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIRRSKPLLGTFVEVRIDDVYPQDCAHLAETAIAAAFSVIEQAEALMSFQRSDSDLSRLHAASVGEAVRVHPWTMRVLRE
AQRMHERTGGVFDPTVARMLVAHKILPRPAGPTAEVDVRFADVVMLDENRISKRRALWLDLGGIAKGFAVDMAILSLRRH
NVRSGAVSAGGDLRVFGKHAQPIHVRSANAPGRLELLGRLTNGAVATSGHYFAESFGLPPGTASIRSQQAPMEAPCAERT
VTVIAPRCIWADALTKVAMLAGTTAPATVRALSSYHAHVVAS

Sequences:

>Translated_282_residues
MIRRSKPLLGTFVEVRIDDVYPQDCAHLAETAIAAAFSVIEQAEALMSFQRSDSDLSRLHAASVGEAVRVHPWTMRVLRE
AQRMHERTGGVFDPTVARMLVAHKILPRPAGPTAEVDVRFADVVMLDENRISKRRALWLDLGGIAKGFAVDMAILSLRRH
NVRSGAVSAGGDLRVFGKHAQPIHVRSANAPGRLELLGRLTNGAVATSGHYFAESFGLPPGTASIRSQQAPMEAPCAERT
VTVIAPRCIWADALTKVAMLAGTTAPATVRALSSYHAHVVAS
>Mature_282_residues
MIRRSKPLLGTFVEVRIDDVYPQDCAHLAETAIAAAFSVIEQAEALMSFQRSDSDLSRLHAASVGEAVRVHPWTMRVLRE
AQRMHERTGGVFDPTVARMLVAHKILPRPAGPTAEVDVRFADVVMLDENRISKRRALWLDLGGIAKGFAVDMAILSLRRH
NVRSGAVSAGGDLRVFGKHAQPIHVRSANAPGRLELLGRLTNGAVATSGHYFAESFGLPPGTASIRSQQAPMEAPCAERT
VTVIAPRCIWADALTKVAMLAGTTAPATVRALSSYHAHVVAS

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30422; Mature: 30422

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSKPLLGTFVEVRIDDVYPQDCAHLAETAIAAAFSVIEQAEALMSFQRSDSDLSRLH
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AASVGEAVRVHPWTMRVLREAQRMHERTGGVFDPTVARMLVAHKILPRPAGPTAEVDVRF
HHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADVVMLDENRISKRRALWLDLGGIAKGFAVDMAILSLRRHNVRSGAVSAGGDLRVFGKHA
EEEEEECCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
QPIHVRSANAPGRLELLGRLTNGAVATSGHYFAESFGLPPGTASIRSQQAPMEAPCAERT
CEEEEECCCCCCHHHHHHHHCCCEEECCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCE
VTVIAPRCIWADALTKVAMLAGTTAPATVRALSSYHAHVVAS
EEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MIRRSKPLLGTFVEVRIDDVYPQDCAHLAETAIAAAFSVIEQAEALMSFQRSDSDLSRLH
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AASVGEAVRVHPWTMRVLREAQRMHERTGGVFDPTVARMLVAHKILPRPAGPTAEVDVRF
HHHHCCEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADVVMLDENRISKRRALWLDLGGIAKGFAVDMAILSLRRHNVRSGAVSAGGDLRVFGKHA
EEEEEECCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
QPIHVRSANAPGRLELLGRLTNGAVATSGHYFAESFGLPPGTASIRSQQAPMEAPCAERT
CEEEEECCCCCCHHHHHHHHCCCEEECCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCE
VTVIAPRCIWADALTKVAMLAGTTAPATVRALSSYHAHVVAS
EEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA