Click here to switch to the map view.

The map label for this gene is 187928926

Identifier: 187928926

GI number: 187928926

Start: 1934499

End: 1934990

Strand: Reverse

Name: 187928926

Synonym: Rpic_1845

Alternate gene names: NA

Gene position: 1934990-1934499 (Counterclockwise)

Preceding gene: 187928927

Following gene: 187928921

Centisome position: 49.08

GC content: 56.1

Gene sequence:

>492_bases
ATGACGCAATCCTCGCATCGACATCCCCTGAAAGGGACAGGCATTCGTCTGCATCCGTATCACTATTGGGTTGCTCTCGC
CGTATTGCTAGCGGTAGCGGTGTCTGGGCTGATATGGACGGTTTTGCACGATTTGCTTCAATGGGAGGACGCACCGATCG
TCCGCCAGATTCTGCAGTTGCATGGCGCCTTTGCGTTCTGCAGCCTGATTCTCTTGGGTTCCATGCTGCCGCAACACATT
CGCTTCGCGTGGGTTGCGCGCCGAAACCTCGTGACCGGTACGTTGACGGGAATCGTGTTCTTGTTGCTGACCATCACCGC
TTATGGGCTGTATTACGGGCCCGAAGATTGGAGTGGTCTTACGAAGACTGTGCACCTTGTTCTGGGCATTGCTGCTGTTG
CGGCCGTGCCCCTCCACATGTTCATTGGACGGAAGCGACACAACGGCTACCGTGCCCCCGCGAGCAAGAATGTACGGCAC
GAAAAAACCTGA

Upstream 100 bases:

>100_bases
TCTGGGCGGACGCACTGACCAAGGTCGCCATGCTTGCCGGTACGACGGCGCCCGCCACGGTCCGCGCGCTATCAAGCTAT
CACGCACACGTTGTTGCATC

Downstream 100 bases:

>100_bases
AGCGAATCGACGAGGCAATCGTACAAGCCTGCGCAGCAAACCGCTCGGCGCGCGGGAAAGAGCCCCGGGGGAGTAACCCC
CCGGGGAGGGGGAAGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTQSSHRHPLKGTGIRLHPYHYWVALAVLLAVAVSGLIWTVLHDLLQWEDAPIVRQILQLHGAFAFCSLILLGSMLPQHI
RFAWVARRNLVTGTLTGIVFLLLTITAYGLYYGPEDWSGLTKTVHLVLGIAAVAAVPLHMFIGRKRHNGYRAPASKNVRH
EKT

Sequences:

>Translated_163_residues
MTQSSHRHPLKGTGIRLHPYHYWVALAVLLAVAVSGLIWTVLHDLLQWEDAPIVRQILQLHGAFAFCSLILLGSMLPQHI
RFAWVARRNLVTGTLTGIVFLLLTITAYGLYYGPEDWSGLTKTVHLVLGIAAVAAVPLHMFIGRKRHNGYRAPASKNVRH
EKT
>Mature_162_residues
TQSSHRHPLKGTGIRLHPYHYWVALAVLLAVAVSGLIWTVLHDLLQWEDAPIVRQILQLHGAFAFCSLILLGSMLPQHIR
FAWVARRNLVTGTLTGIVFLLLTITAYGLYYGPEDWSGLTKTVHLVLGIAAVAAVPLHMFIGRKRHNGYRAPASKNVRHE
KT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18217; Mature: 18086

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSSHRHPLKGTGIRLHPYHYWVALAVLLAVAVSGLIWTVLHDLLQWEDAPIVRQILQL
CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HGAFAFCSLILLGSMLPQHIRFAWVARRNLVTGTLTGIVFLLLTITAYGLYYGPEDWSGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TKTVHLVLGIAAVAAVPLHMFIGRKRHNGYRAPASKNVRHEKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQSSHRHPLKGTGIRLHPYHYWVALAVLLAVAVSGLIWTVLHDLLQWEDAPIVRQILQL
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
HGAFAFCSLILLGSMLPQHIRFAWVARRNLVTGTLTGIVFLLLTITAYGLYYGPEDWSGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TKTVHLVLGIAAVAAVPLHMFIGRKRHNGYRAPASKNVRHEKT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA