Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928917
Identifier: 187928917
GI number: 187928917
Start: 1926205
End: 1926693
Strand: Reverse
Name: 187928917
Synonym: Rpic_1836
Alternate gene names: NA
Gene position: 1926693-1926205 (Counterclockwise)
Preceding gene: 187928918
Following gene: 187928915
Centisome position: 48.87
GC content: 61.35
Gene sequence:
>489_bases ATGACAACACCGTTGAGCTCGCAACCTATATCCACGTCTAGGCGATCCCTGGTCGTCGGCCTGGCTCTCTTGCCTGCCAT AGCTTTGGCGCAGAAGTCTGAACCTAAGCCTACAGTCCAGGTTTGGAAGACGCCGGGTTGTGGATGCTGCAAGGATTGGT TGTCCCACCTGCGGGACAACGGATTCGATGTAGTCGCACATGACGTCGAGGACACCGTCGAGGCACGGCGCACCGCAGGC ATTCCCGATCGCTATGCTTCGTGCCATACGGCCGCCGTGCAGGGCTACGCCTTGGAAGGCCATGTGCCCGCGCGCGAAGT CAGGCGCCTGCTGCGGGAGCGCCCTAAGGCAATCGGGCTGGCGGTCCCCAGCATGCCCATCGGCGCACCTGGCATGGACG GTCCGGCGTACGGTAATCGACGTATGCCGCACAGCGTGTTGCTGATCGGTTTGGATGGAACATCCACCGTGTTCCAAGCG TACAGTTGA
Upstream 100 bases:
>100_bases CCAGCCTTGCCGTGATAATACTGGCTCTGGTTGCTTGGCTGGGTGTGCTTTCTCCGCCCGGGACCTAATTCCGGCATTTT TGTGTAGCCTTACACGCGTC
Downstream 100 bases:
>100_bases ACCAACAGAAGAAGACGTTGGCCGTGAAAGCGACGGGTTCACCAGGTATGTCGCCAACGAATCTGGCGATACGCTGGCGT AATAGCTGGTTGGCTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTTPLSSQPISTSRRSLVVGLALLPAIALAQKSEPKPTVQVWKTPGCGCCKDWLSHLRDNGFDVVAHDVEDTVEARRTAG IPDRYASCHTAAVQGYALEGHVPAREVRRLLRERPKAIGLAVPSMPIGAPGMDGPAYGNRRMPHSVLLIGLDGTSTVFQA YS
Sequences:
>Translated_162_residues MTTPLSSQPISTSRRSLVVGLALLPAIALAQKSEPKPTVQVWKTPGCGCCKDWLSHLRDNGFDVVAHDVEDTVEARRTAG IPDRYASCHTAAVQGYALEGHVPAREVRRLLRERPKAIGLAVPSMPIGAPGMDGPAYGNRRMPHSVLLIGLDGTSTVFQA YS >Mature_161_residues TTPLSSQPISTSRRSLVVGLALLPAIALAQKSEPKPTVQVWKTPGCGCCKDWLSHLRDNGFDVVAHDVEDTVEARRTAGI PDRYASCHTAAVQGYALEGHVPAREVRRLLRERPKAIGLAVPSMPIGAPGMDGPAYGNRRMPHSVLLIGLDGTSTVFQAY S
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17383; Mature: 17252
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLSSQPISTSRRSLVVGLALLPAIALAQKSEPKPTVQVWKTPGCGCCKDWLSHLRDN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCC GFDVVAHDVEDTVEARRTAGIPDRYASCHTAAVQGYALEGHVPAREVRRLLRERPKAIGL CCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCHHEEE AVPSMPIGAPGMDGPAYGNRRMPHSVLLIGLDGTSTVFQAYS ECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHEECC >Mature Secondary Structure TTPLSSQPISTSRRSLVVGLALLPAIALAQKSEPKPTVQVWKTPGCGCCKDWLSHLRDN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCC GFDVVAHDVEDTVEARRTAGIPDRYASCHTAAVQGYALEGHVPAREVRRLLRERPKAIGL CCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCHHEEE AVPSMPIGAPGMDGPAYGNRRMPHSVLLIGLDGTSTVFQAYS ECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA