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The map label for this gene is copB [H]

Identifier: 187928861

GI number: 187928861

Start: 1874870

End: 1875868

Strand: Reverse

Name: copB [H]

Synonym: Rpic_1778

Alternate gene names: 187928861

Gene position: 1875868-1874870 (Counterclockwise)

Preceding gene: 187928862

Following gene: 187928860

Centisome position: 47.58

GC content: 60.56

Gene sequence:

>999_bases
ATGCTCGACTTCCAACGCAGATCAATCATGCGCAAGCACGCAAGGACATTGTTGACTGTAGCGCTGGCCGCCGCTGGCAT
CGGAGCTGCCTCGGCTCAGGACATCCAACTGATGAACGGGGAGACTGCCCCGGCATCCCAATCTGGGACCCAGAATACTG
GCGGTTCAATGCAAGGGATGGACCATAGCTCAATGCAAGGGATGGACCACGGCTCGATGCAGGGGATGGATCACGGCAGC
ATGAACATGCAAGGCGGTTCGGCGCCACCCGATGCGCGCGATCCCGATGCCTATTCGGGCGGATACCAGCTCGGCACCGG
CAAATACGCGCTGGGCGACCCCCGCCACATGATGATGATGGCGGACGCGCACAACTTTGGCTCGGTGCTGGTGGACCGGT
TGGAGTGGGTGCACGGTAACAATGCCAATGCAACGGCCTACGAGCTGCAGGCTCGGTTCGGCAGCGCGTACAACAAAGCT
GTCCTGAAAGCCGAGGGTGACGTATCGAAGGGGCGCTTCGAAGAAGCGCGCACCGAATTGCTATGGAGCCATGCCGTAGC
AACGTTCTGGGATACCCAGTTGGGGATTCGGAACGACGCGGGCTTTGGCCGGCCCGCACGCAACTGGGTGGCGTTTGGCG
TGCAAGGCTTGGCCCCGTATTGGTTTGACCTCGAAGCAACGGCTTATGTGGGCAACAGCGGACGCACAGCACTGCGCCTC
TCCAGCGAATATGAACTGTTGTTGACCCAGCGGCTGATTCTGCAACCGCGCATTGAAGCCAACTTTTATGGCAAGCGCGA
TCCGGATCTTGCCATCGGCAGTGGGCTTTCCAACGCGACGGCCGGCTTACGGCTGCGCTATGAGTTCAGTCGCCAGTTTG
CTCCCTATATCGGTGTCGAACGCAGCCAGTCATTTGGCGGTACAGCCAACATGATCGAAGCGGCGGGCGGACGTCGTGGC
GAGACCCGCTTCGTTGCGGGCGTGCGCCTCTGGTTCTAG

Upstream 100 bases:

>100_bases
GCTTTCTGGTCACAGCAGACGCGCTGGGTCGCTGGGCGTGGCACTGCCATCTGATGTTGCACATGGACGCGGGTATGTTC
CGCGAAGTGGTGGTGGCCTG

Downstream 100 bases:

>100_bases
TTTTCTCACCTCCTAACCTCACGGGTGTTCCTATGTTCACGTCTCGTTTTGCTACCAAGGCCATCATCGGCACGTCCCTG
GCGCTCCTGGCTTCGGCCGC

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLDFQRRSIMRKHARTLLTVALAAAGIGAASAQDIQLMNGETAPASQSGTQNTGGSMQGMDHSSMQGMDHGSMQGMDHGS
MNMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNNANATAYELQARFGSAYNKA
VLKAEGDVSKGRFEEARTELLWSHAVATFWDTQLGIRNDAGFGRPARNWVAFGVQGLAPYWFDLEATAYVGNSGRTALRL
SSEYELLLTQRLILQPRIEANFYGKRDPDLAIGSGLSNATAGLRLRYEFSRQFAPYIGVERSQSFGGTANMIEAAGGRRG
ETRFVAGVRLWF

Sequences:

>Translated_332_residues
MLDFQRRSIMRKHARTLLTVALAAAGIGAASAQDIQLMNGETAPASQSGTQNTGGSMQGMDHSSMQGMDHGSMQGMDHGS
MNMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNNANATAYELQARFGSAYNKA
VLKAEGDVSKGRFEEARTELLWSHAVATFWDTQLGIRNDAGFGRPARNWVAFGVQGLAPYWFDLEATAYVGNSGRTALRL
SSEYELLLTQRLILQPRIEANFYGKRDPDLAIGSGLSNATAGLRLRYEFSRQFAPYIGVERSQSFGGTANMIEAAGGRRG
ETRFVAGVRLWF
>Mature_332_residues
MLDFQRRSIMRKHARTLLTVALAAAGIGAASAQDIQLMNGETAPASQSGTQNTGGSMQGMDHSSMQGMDHGSMQGMDHGS
MNMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMMADAHNFGSVLVDRLEWVHGNNANATAYELQARFGSAYNKA
VLKAEGDVSKGRFEEARTELLWSHAVATFWDTQLGIRNDAGFGRPARNWVAFGVQGLAPYWFDLEATAYVGNSGRTALRL
SSEYELLLTQRLILQPRIEANFYGKRDPDLAIGSGLSNATAGLRLRYEFSRQFAPYIGVERSQSFGGTANMIEAAGGRRG
ETRFVAGVRLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 36078; Mature: 36078

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDFQRRSIMRKHARTLLTVALAAAGIGAASAQDIQLMNGETAPASQSGTQNTGGSMQGM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DHSSMQGMDHGSMQGMDHGSMNMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMM
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEE
ADAHNFGSVLVDRLEWVHGNNANATAYELQARFGSAYNKAVLKAEGDVSKGRFEEARTEL
ECCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHH
LWSHAVATFWDTQLGIRNDAGFGRPARNWVAFGVQGLAPYWFDLEATAYVGNSGRTALRL
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHCCCEEEEEEEEEEECCCCCEEEEE
SSEYELLLTQRLILQPRIEANFYGKRDPDLAIGSGLSNATAGLRLRYEFSRQFAPYIGVE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCC
RSQSFGGTANMIEAAGGRRGETRFVAGVRLWF
CCCCCCCCHHHHHHCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MLDFQRRSIMRKHARTLLTVALAAAGIGAASAQDIQLMNGETAPASQSGTQNTGGSMQGM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
DHSSMQGMDHGSMQGMDHGSMNMQGGSAPPDARDPDAYSGGYQLGTGKYALGDPRHMMMM
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCEEEEE
ADAHNFGSVLVDRLEWVHGNNANATAYELQARFGSAYNKAVLKAEGDVSKGRFEEARTEL
ECCCCHHHHHHHHHHHHCCCCCCCHHEEHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHH
LWSHAVATFWDTQLGIRNDAGFGRPARNWVAFGVQGLAPYWFDLEATAYVGNSGRTALRL
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHCCCEEEEEEEEEEECCCCCEEEEE
SSEYELLLTQRLILQPRIEANFYGKRDPDLAIGSGLSNATAGLRLRYEFSRQFAPYIGVE
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCC
RSQSFGGTANMIEAAGGRRGETRFVAGVRLWF
CCCCCCCCHHHHHHCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]