Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928831
Identifier: 187928831
GI number: 187928831
Start: 1843586
End: 1844026
Strand: Reverse
Name: 187928831
Synonym: Rpic_1748
Alternate gene names: NA
Gene position: 1844026-1843586 (Counterclockwise)
Preceding gene: 187928836
Following gene: 187928830
Centisome position: 46.77
GC content: 57.14
Gene sequence:
>441_bases GTGGGCGGCCTCGCGATCCTTTGGTTCGTGATTCGAAAACGGTGTCGTCGTGTCAGCCCAAACCGACCTGTTTCTGAGGC GCTACCTGGCGCAGCCAAGGTACGAGGGCAGGTGATGGCGGAACGAAACGAGGTGGCAATTCAGGCGACGCGGCAGTTGT TGCAGTCGATGCTGCTGCAGTTCGAGCGCTGGAAATATACGCCATCGGAAACGGAAGTGGCGATGCTTCTCATAAAAGGG TTGACCCTTGAAGAGTGCGCTCACTCGCTAGCGTGGCATGATGTGACGGTGCGGACAATTGCCGCGGGCGTATTCGCCAA GGCGAACCTCAGCAATCGCCATCAATTTGCCGCCTACTTTTTCGGTGATCTGTTGGTTGAGCCGATCGAGCCTGCACCTC GATCAAAAACCGGTGAGTGTAGGCACGACGCCGGCATGTAA
Upstream 100 bases:
>100_bases ACTTCTGATGGCAATCTCGACCTATCAGGCGTGGGATTTCTACCACCTTGCAACGCGAACACCGGACGCTCATGTCGTCG CCGACGCAGTCGCGTAGGTA
Downstream 100 bases:
>100_bases GTTGTCGCGCTTGACCTTCAAGCAAAGACCGGAACGGTAAAAATCCGATTATTGGTATCTGTGCCACAGTACGGTGCTGT GGCTGTATCTCTATTTCGAT
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGGLAILWFVIRKRCRRVSPNRPVSEALPGAAKVRGQVMAERNEVAIQATRQLLQSMLLQFERWKYTPSETEVAMLLIKG LTLEECAHSLAWHDVTVRTIAAGVFAKANLSNRHQFAAYFFGDLLVEPIEPAPRSKTGECRHDAGM
Sequences:
>Translated_146_residues MGGLAILWFVIRKRCRRVSPNRPVSEALPGAAKVRGQVMAERNEVAIQATRQLLQSMLLQFERWKYTPSETEVAMLLIKG LTLEECAHSLAWHDVTVRTIAAGVFAKANLSNRHQFAAYFFGDLLVEPIEPAPRSKTGECRHDAGM >Mature_145_residues GGLAILWFVIRKRCRRVSPNRPVSEALPGAAKVRGQVMAERNEVAIQATRQLLQSMLLQFERWKYTPSETEVAMLLIKGL TLEECAHSLAWHDVTVRTIAAGVFAKANLSNRHQFAAYFFGDLLVEPIEPAPRSKTGECRHDAGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16347; Mature: 16216
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLAILWFVIRKRCRRVSPNRPVSEALPGAAKVRGQVMAERNEVAIQATRQLLQSMLLQ CCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERWKYTPSETEVAMLLIKGLTLEECAHSLAWHDVTVRTIAAGVFAKANLSNRHQFAAYF HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FGDLLVEPIEPAPRSKTGECRHDAGM HHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GGLAILWFVIRKRCRRVSPNRPVSEALPGAAKVRGQVMAERNEVAIQATRQLLQSMLLQ CHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERWKYTPSETEVAMLLIKGLTLEECAHSLAWHDVTVRTIAAGVFAKANLSNRHQFAAYF HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FGDLLVEPIEPAPRSKTGECRHDAGM HHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA