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The map label for this gene is rfbF [H]

Identifier: 187927725

GI number: 187927725

Start: 669138

End: 670064

Strand: Reverse

Name: rfbF [H]

Synonym: Rpic_0629

Alternate gene names: 187927725

Gene position: 670064-669138 (Counterclockwise)

Preceding gene: 187927726

Following gene: 187927724

Centisome position: 17.0

GC content: 55.66

Gene sequence:

>927_bases
ATGACAACTACCACCTCCATACTTGAGCCCCAGGTCGATCTCTATGCCGTAGTGGTCACTTATTCGCCAGACTGGCCTCA
AACCCTCGCGCTTATTGAAGCACTAGAAAAGCAACAGGCGCTTACGATTGTCGTCGACAATGGCTCCCCAGAAGCCATGA
TCGCCCCCCTAATCGAAAAGAGCCCCCCAAGAACACGGTGGCTGCGTAATGAAAGCAATGAAGGCATCGCAGCTGCGCAA
AATCGCGGCATTCGGGACGCGATGTCGCGCGGTGCCACGCATATCGTCCTATTCGACCAAGACAGCAGCCCTGCCCCGGA
CATGCTTGCCCGGCTATTGAGCGCGGAAGCGACACTACTTGCGGCGGGCGCCTCCGTAGCGGCGGTTGGCCCGCAGTTGA
TAGATGAAACGACTGGCGAGAAGGCTCCCTTCATTACCTTCGAAAATGGGCACAAGCGTCGCGCAGTGACTTCGCCCGAA
AGCAGCCAGATTCTGTGTTTCTCGCTTCTCGCATCAGGCACGTTGATCCGCACCGAAGTACTCGAGCGCATCGGCCTAAT
GAAAGAGGAGCTCTTCATTGAGTATGTTGACGTGGAATGGGGTGCGCGAGCTCGCGCTGCAGGACTACATTGCTACGGTA
TCGGGGAAGCACTGCTCTACCATAATTTGGGCGACGATCGCATTCAGGTGCTGCCCAACTTCTTCGTCCCGCTGCACAAA
CCGGTGCGTCACTACTACACCATGCGCAATGCAATCTACATGCAGAAGCTGGCCTACGTACCGGCTTACTGGAAGCGCAG
CGATCTGCTCCGGACTGTAGCGGGCTTTATTATCTTCACACTCTTCAATCCGCCGAGATTAATGCAACTCAGGATGATGA
TTAAGGGAATTGCGCATGGCTTTGCCGGCCGGTACGGACCTCTTTGA

Upstream 100 bases:

>100_bases
TCGCTCTCGATTTCGCAGTTAATCTCGCATTTGTCTGGTTAGTGCTGCAAATCGCGAAACGCTGTACGGCATATCAATCG
CGCTTGCGATCGCATTGAAG

Downstream 100 bases:

>100_bases
GCGACATCCACAATGATGATCACCGCTAACCCTCGGCCGTTCTCCGTCTTGATGTCACTGTACGCTCGGGAATCACCCGC
AGCGCTTGAAGTGGCGCTTG

Product: rhamnosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTTTTSILEPQVDLYAVVVTYSPDWPQTLALIEALEKQQALTIVVDNGSPEAMIAPLIEKSPPRTRWLRNESNEGIAAAQ
NRGIRDAMSRGATHIVLFDQDSSPAPDMLARLLSAEATLLAAGASVAAVGPQLIDETTGEKAPFITFENGHKRRAVTSPE
SSQILCFSLLASGTLIRTEVLERIGLMKEELFIEYVDVEWGARARAAGLHCYGIGEALLYHNLGDDRIQVLPNFFVPLHK
PVRHYYTMRNAIYMQKLAYVPAYWKRSDLLRTVAGFIIFTLFNPPRLMQLRMMIKGIAHGFAGRYGPL

Sequences:

>Translated_308_residues
MTTTTSILEPQVDLYAVVVTYSPDWPQTLALIEALEKQQALTIVVDNGSPEAMIAPLIEKSPPRTRWLRNESNEGIAAAQ
NRGIRDAMSRGATHIVLFDQDSSPAPDMLARLLSAEATLLAAGASVAAVGPQLIDETTGEKAPFITFENGHKRRAVTSPE
SSQILCFSLLASGTLIRTEVLERIGLMKEELFIEYVDVEWGARARAAGLHCYGIGEALLYHNLGDDRIQVLPNFFVPLHK
PVRHYYTMRNAIYMQKLAYVPAYWKRSDLLRTVAGFIIFTLFNPPRLMQLRMMIKGIAHGFAGRYGPL
>Mature_307_residues
TTTTSILEPQVDLYAVVVTYSPDWPQTLALIEALEKQQALTIVVDNGSPEAMIAPLIEKSPPRTRWLRNESNEGIAAAQN
RGIRDAMSRGATHIVLFDQDSSPAPDMLARLLSAEATLLAAGASVAAVGPQLIDETTGEKAPFITFENGHKRRAVTSPES
SQILCFSLLASGTLIRTEVLERIGLMKEELFIEYVDVEWGARARAAGLHCYGIGEALLYHNLGDDRIQVLPNFFVPLHKP
VRHYYTMRNAIYMQKLAYVPAYWKRSDLLRTVAGFIIFTLFNPPRLMQLRMMIKGIAHGFAGRYGPL

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34198; Mature: 34067

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTSILEPQVDLYAVVVTYSPDWPQTLALIEALEKQQALTIVVDNGSPEAMIAPLIEK
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHC
SPPRTRWLRNESNEGIAAAQNRGIRDAMSRGATHIVLFDQDSSPAPDMLARLLSAEATLL
CCCHHHHHCCCCCCCCHHHHCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCHHEE
AAGASVAAVGPQLIDETTGEKAPFITFENGHKRRAVTSPESSQILCFSLLASGTLIRTEV
ECCCCHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LERIGLMKEELFIEYVDVEWGARARAAGLHCYGIGEALLYHNLGDDRIQVLPNFFVPLHK
HHHHCCHHHHHEEEEEECCCCCCHHHCCEEEEEHHHHHHHCCCCCCHHHHCCHHHCCCHH
PVRHYYTMRNAIYMQKLAYVPAYWKRSDLLRTVAGFIIFTLFNPPRLMQLRMMIKGIAHG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAGRYGPL
HCCCCCCC
>Mature Secondary Structure 
TTTTSILEPQVDLYAVVVTYSPDWPQTLALIEALEKQQALTIVVDNGSPEAMIAPLIEK
CCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHC
SPPRTRWLRNESNEGIAAAQNRGIRDAMSRGATHIVLFDQDSSPAPDMLARLLSAEATLL
CCCHHHHHCCCCCCCCHHHHCCCHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCHHEE
AAGASVAAVGPQLIDETTGEKAPFITFENGHKRRAVTSPESSQILCFSLLASGTLIRTEV
ECCCCHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LERIGLMKEELFIEYVDVEWGARARAAGLHCYGIGEALLYHNLGDDRIQVLPNFFVPLHK
HHHHCCHHHHHEEEEEECCCCCCHHHCCEEEEEHHHHHHHCCCCCCHHHHCCHHHCCCHH
PVRHYYTMRNAIYMQKLAYVPAYWKRSDLLRTVAGFIIFTLFNPPRLMQLRMMIKGIAHG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAGRYGPL
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]