Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927726
Identifier: 187927726
GI number: 187927726
Start: 670067
End: 671374
Strand: Reverse
Name: 187927726
Synonym: Rpic_0630
Alternate gene names: NA
Gene position: 671374-670067 (Counterclockwise)
Preceding gene: 187927727
Following gene: 187927725
Centisome position: 17.03
GC content: 51.76
Gene sequence:
>1308_bases ATGATGCTTATTGCTGTCTCGATTCTGTTCGCACTCACCGGAGCATTCGCGCTCCGGCTGGCCGGCTTCAACTATATCGG GCAGCAGCCGCATCCGCTCGCATTTCCCATTGGCATGCAGATCTTTCTTGTCACGGTTCCCGGAACCTTGGCAATCGGGC TGTTTGGCATTCCGCTCCTCTATGACCTCCAAAACGAAATAGCGCAATCGACTATGCGCTATGGCGTCATCAGCACGATG ACGAGCATCGGCATCCTCCTTTGGATGCTGGCCGTTGCATTTCGCACGCGGTTCTTTGTGCACGTGCAGTATCGCAAGAC CGAGACCGATATAAGCACTTTGCGGGTGCTAACGATCGCCTCAGCTTTCATACTTGTGATAAAGCTTGTATCAGTAAGCG AGATTCCGCTATTGCTCGCACTAAAGGGGGACGTCCAAGGTGCGGCAGAAGCAAAGGTACGCATACTAACTAACCAGGAC GGAATCACAGTATTCGGCCTGAACTATATTTTCCGTTCCTTTACGTCTGTCGTTTACTTGATTTCAGTCTCGCTAGTTGC ATACGACCCACATAATCGCGCCAAACGGGTCGTGCTGTTCTGGAATCTGCCGCTGATGATCCTGAACGCTGTGTACGACG TCCAGAAGTACACCTTGGTGCTGTTGATGTTGCTCACCTTCTGGGTGCTATACACACGAACGGGAAGGTTCCGCTACATC ATCATAGGTGCCTTACTCGGCCTTGCCTTATCTCTTCTGATGTTTGTAGTCACCCTTGGCTACGATTTCGATCCGACACT CCTTCAGAGCACCATGTACCGGCTATTCGTTGGGCAGATGGAGGGGATGTTCTACATCTACGAGTTCCTGCGACCAAGCC CCGACTACGCTTGGCTAGGGTTGCCGCTAGCACCACTGTTTGGCGTGCCTCAACTGGATCCTGCAGCAGAAGTCGTCAAG ATTCTGTTTCCCAACGCAGGAGACACTTGGCTTAACGCCAACACCTACTACTTGGCCCATGCTTGGACGATCTTTGGCCC ACTATCAGTTTTGATAGGCCCCGTGATGGTCATGCTTAACCTCATTGTTATGCTGCGCCTCGCCCAGCCGCTTGTACGTC AAGCACCCCAGTACTACCTGCCATTGTTGCTGTGGCAGTTGGCTCGACTACCTCTCATCAACATCTTTACCGAGTTTCTA TACTTCAAAGTCGCTCTCGATTTCGCAGTTAATCTCGCATTTGTCTGGTTAGTGCTGCAAATCGCGAAACGCTGTACGGC ATATCAATCGCGCTTGCGATCGCATTGA
Upstream 100 bases:
>100_bases CTATTGGCGTCGCTCAACTTTCTTTCTTGTTCTTTGAAAGCAAATTCCTGCGTTTGAAAGACGCGCTAGCCGCTTCCCTG CCCCGTAAAACGGAATCGGC
Downstream 100 bases:
>100_bases AGATGACAACTACCACCTCCATACTTGAGCCCCAGGTCGATCTCTATGCCGTAGTGGTCACTTATTCGCCAGACTGGCCT CAAACCCTCGCGCTTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MMLIAVSILFALTGAFALRLAGFNYIGQQPHPLAFPIGMQIFLVTVPGTLAIGLFGIPLLYDLQNEIAQSTMRYGVISTM TSIGILLWMLAVAFRTRFFVHVQYRKTETDISTLRVLTIASAFILVIKLVSVSEIPLLLALKGDVQGAAEAKVRILTNQD GITVFGLNYIFRSFTSVVYLISVSLVAYDPHNRAKRVVLFWNLPLMILNAVYDVQKYTLVLLMLLTFWVLYTRTGRFRYI IIGALLGLALSLLMFVVTLGYDFDPTLLQSTMYRLFVGQMEGMFYIYEFLRPSPDYAWLGLPLAPLFGVPQLDPAAEVVK ILFPNAGDTWLNANTYYLAHAWTIFGPLSVLIGPVMVMLNLIVMLRLAQPLVRQAPQYYLPLLLWQLARLPLINIFTEFL YFKVALDFAVNLAFVWLVLQIAKRCTAYQSRLRSH
Sequences:
>Translated_435_residues MMLIAVSILFALTGAFALRLAGFNYIGQQPHPLAFPIGMQIFLVTVPGTLAIGLFGIPLLYDLQNEIAQSTMRYGVISTM TSIGILLWMLAVAFRTRFFVHVQYRKTETDISTLRVLTIASAFILVIKLVSVSEIPLLLALKGDVQGAAEAKVRILTNQD GITVFGLNYIFRSFTSVVYLISVSLVAYDPHNRAKRVVLFWNLPLMILNAVYDVQKYTLVLLMLLTFWVLYTRTGRFRYI IIGALLGLALSLLMFVVTLGYDFDPTLLQSTMYRLFVGQMEGMFYIYEFLRPSPDYAWLGLPLAPLFGVPQLDPAAEVVK ILFPNAGDTWLNANTYYLAHAWTIFGPLSVLIGPVMVMLNLIVMLRLAQPLVRQAPQYYLPLLLWQLARLPLINIFTEFL YFKVALDFAVNLAFVWLVLQIAKRCTAYQSRLRSH >Mature_435_residues MMLIAVSILFALTGAFALRLAGFNYIGQQPHPLAFPIGMQIFLVTVPGTLAIGLFGIPLLYDLQNEIAQSTMRYGVISTM TSIGILLWMLAVAFRTRFFVHVQYRKTETDISTLRVLTIASAFILVIKLVSVSEIPLLLALKGDVQGAAEAKVRILTNQD GITVFGLNYIFRSFTSVVYLISVSLVAYDPHNRAKRVVLFWNLPLMILNAVYDVQKYTLVLLMLLTFWVLYTRTGRFRYI IIGALLGLALSLLMFVVTLGYDFDPTLLQSTMYRLFVGQMEGMFYIYEFLRPSPDYAWLGLPLAPLFGVPQLDPAAEVVK ILFPNAGDTWLNANTYYLAHAWTIFGPLSVLIGPVMVMLNLIVMLRLAQPLVRQAPQYYLPLLLWQLARLPLINIFTEFL YFKVALDFAVNLAFVWLVLQIAKRCTAYQSRLRSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49180; Mature: 49180
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIAVSILFALTGAFALRLAGFNYIGQQPHPLAFPIGMQIFLVTVPGTLAIGLFGIPLL CHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHH YDLQNEIAQSTMRYGVISTMTSIGILLWMLAVAFRTRFFVHVQYRKTETDISTLRVLTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHH SAFILVIKLVSVSEIPLLLALKGDVQGAAEAKVRILTNQDGITVFGLNYIFRSFTSVVYL HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHH ISVSLVAYDPHNRAKRVVLFWNLPLMILNAVYDVQKYTLVLLMLLTFWVLYTRTGRFRYI HHHHHEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IIGALLGLALSLLMFVVTLGYDFDPTLLQSTMYRLFVGQMEGMFYIYEFLRPSPDYAWLG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC LPLAPLFGVPQLDPAAEVVKILFPNAGDTWLNANTYYLAHAWTIFGPLSVLIGPVMVMLN CCHHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH LIVMLRLAQPLVRQAPQYYLPLLLWQLARLPLINIFTEFLYFKVALDFAVNLAFVWLVLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKRCTAYQSRLRSH HHHHHHHHHHHHCCC >Mature Secondary Structure MMLIAVSILFALTGAFALRLAGFNYIGQQPHPLAFPIGMQIFLVTVPGTLAIGLFGIPLL CHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEECCCCEEEEEECCHHHHHHHHHHHHH YDLQNEIAQSTMRYGVISTMTSIGILLWMLAVAFRTRFFVHVQYRKTETDISTLRVLTIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHH SAFILVIKLVSVSEIPLLLALKGDVQGAAEAKVRILTNQDGITVFGLNYIFRSFTSVVYL HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHH ISVSLVAYDPHNRAKRVVLFWNLPLMILNAVYDVQKYTLVLLMLLTFWVLYTRTGRFRYI HHHHHEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IIGALLGLALSLLMFVVTLGYDFDPTLLQSTMYRLFVGQMEGMFYIYEFLRPSPDYAWLG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC LPLAPLFGVPQLDPAAEVVKILFPNAGDTWLNANTYYLAHAWTIFGPLSVLIGPVMVMLN CCHHHHCCCCCCCHHHHHHHHHCCCCCCCEECCCEEEEEEHHHHHHHHHHHHHHHHHHHH LIVMLRLAQPLVRQAPQYYLPLLLWQLARLPLINIFTEFLYFKVALDFAVNLAFVWLVLQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAKRCTAYQSRLRSH HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA