Click here to switch to the map view.

The map label for this gene is 187927686

Identifier: 187927686

GI number: 187927686

Start: 625046

End: 625384

Strand: Reverse

Name: 187927686

Synonym: Rpic_0590

Alternate gene names: NA

Gene position: 625384-625046 (Counterclockwise)

Preceding gene: 187927687

Following gene: 187927685

Centisome position: 15.86

GC content: 63.13

Gene sequence:

>339_bases
ATGAACACCAATCTTAAATACCTGCAACGCGCCGCACTCGTGATCCTGGCTTGCCAGGCCCTGACTGCCTGCATGACCAC
GACACCCAACTGGGACAAGCACTTCGGTGAGGCCGTCACCAGCGTCAAGCAAGCACAGGTGATCAATCCCGACGCACCGG
CCGGCTTGCCCGCTCTGGATGGCTATGACGGCAAAGCCGCCGTGGCCGCCATGAGCAACTATGACCGCTCGATGACCCGC
TTCCCCGCTGGGGGTACTGGCACCGGCAGCGGTGGGTACGGCGGATTCGGCGGCAGTGGATACGGTGGTAGCGGAATGTC
CGGCAGCTTCTCGCGCTGA

Upstream 100 bases:

>100_bases
GCCCAGGCCAGAACCAAGACGCAGGGCCGGCAGACGGCAGTGGCCGACACGACCACAACCCCGCAGACACGCTAACCCGG
GAACCATGTGGAGATATGCC

Downstream 100 bases:

>100_bases
CAGTACAGGGCGGGTGCCCATGCTGCACCCGCCATCGCCAGCCTGATACGAGGCCAGCCCATGCGCGGCGCGATGCAACG
ACATACAAAACACACGATCG

Product: putative lipoprotein

Products: NA

Alternate protein names: Transmembrane Lipoprotein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNTNLKYLQRAALVILACQALTACMTTTPNWDKHFGEAVTSVKQAQVINPDAPAGLPALDGYDGKAAVAAMSNYDRSMTR
FPAGGTGTGSGGYGGFGGSGYGGSGMSGSFSR

Sequences:

>Translated_112_residues
MNTNLKYLQRAALVILACQALTACMTTTPNWDKHFGEAVTSVKQAQVINPDAPAGLPALDGYDGKAAVAAMSNYDRSMTR
FPAGGTGTGSGGYGGFGGSGYGGSGMSGSFSR
>Mature_112_residues
MNTNLKYLQRAALVILACQALTACMTTTPNWDKHFGEAVTSVKQAQVINPDAPAGLPALDGYDGKAAVAAMSNYDRSMTR
FPAGGTGTGSGGYGGFGGSGYGGSGMSGSFSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11377; Mature: 11377

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNLKYLQRAALVILACQALTACMTTTPNWDKHFGEAVTSVKQAQVINPDAPAGLPALD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GYDGKAAVAAMSNYDRSMTRFPAGGTGTGSGGYGGFGGSGYGGSGMSGSFSR
CCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTNLKYLQRAALVILACQALTACMTTTPNWDKHFGEAVTSVKQAQVINPDAPAGLPALD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GYDGKAAVAAMSNYDRSMTRFPAGGTGTGSGGYGGFGGSGYGGSGMSGSFSR
CCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA