Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927685
Identifier: 187927685
GI number: 187927685
Start: 623721
End: 624929
Strand: Reverse
Name: 187927685
Synonym: Rpic_0589
Alternate gene names: NA
Gene position: 624929-623721 (Counterclockwise)
Preceding gene: 187927686
Following gene: 187927684
Centisome position: 15.85
GC content: 62.45
Gene sequence:
>1209_bases ATGCTCAAGATCTTGATTGCCTCCGAAGACGGTGAACGCCTGGCTGACCTTGCGCGCCTCGTAGCCGCCGCCGGCAGCTA CCAGGTCATGCACCTGCATGCTGCACCGGGCAGCCTGTCCACGCATGCCTGCCAACTGCGCGGCGCGGATGCGCTCATCA TCGACCAGCCGAGCGGTGGCCCGAGCCAGATGCTGAGCATCGAACTGCTGCGGCAGCAGTTCGCCGACCTGCCGTGCATC CTCGTCACGCAAACCCAGGAGCGCGACGACCTGATTCGCGCACTGCGCGCAGGCGTCAGCGACATACTGACTTGGCCGCT GGAACGCGCCCAACTGACGACAGCGCTCACGCGGCTGGAAACCAACCACACCCCGAGAACGCGCGAGGAAGCGCGCGTAA TCGCCTTCATCTCCAGCAAGGGCGGCGCGGGTTCCAGCTTCATCGCCAGCAACGTCGGCTATACGCTGGCCGCACACGAA CACAAGCGCGTGCTGTTGATCGACCTGAACACGCAGTTCAGCGACACGCACTTTCTGGTGAGCAACAAGACGCCACCTGC CACGCTGTCCGAAGTGTGCGCACAGGTCGACCGGCTGGACGATGCCTTCCTGGAAGCGTGCTTGACACGCGTAGCCAAGG ACTTTGACGTCCTGGCCGGCGCCAGCGATCCGATAAAGGCGGGCGAGATCAAGAAGGACAAGATCGAGTACGTGCTCTCG CTGGTGTCACCGATCTACGACTTTATCCTGGTGGACGTCGGGCAGGCGATCAACCCGCTGTCGATTGCGGTGCTCGACCA CTGCGACCAGATCTGCGTCGTGGTCCAGCCGACCATTGCCTTTGCCCGCACGGGGCGGCGCCTGCTGGATATCCTGCACG GCCTGCATTACCCCCCCGAAAAGCTGCGCATCCTGGTCAACCGGCATGGCAAGCGCGACGAGCTACCACGCAGCACGCTG GAGCAAGTCTTCGGACAGAAGCTCTTCCATGTGCTTCCTGAAGATGCGGCCGCGGTGGATGACTCCATCTGCCAGGGCAT GCCCATTGCCCAGCATCACCGCAGCAGTGCCATGACCAAGGCGCTCATGGCCTTAGGCAACGTCTTCGCCACAGCGCGCG AGAACGATCGTCATGCTTCACAAGAGAAAGGTTTCTCCTTGAGCAAGTTCTTCTCGCGGGCCAAGACGTCGTCTCCGAAC ATTGCCTGA
Upstream 100 bases:
>100_bases CCCATGCTGCACCCGCCATCGCCAGCCTGATACGAGGCCAGCCCATGCGCGGCGCGATGCAACGACATACAAAACACACG ATCGAACGGGGAGCTTTGCC
Downstream 100 bases:
>100_bases GTTTCTCCTGTCCATTTCGCCAGTCAGACGGAGCCCATCATGTCGATCCGCGAACAACTCTCCCGCCCGGAACACGGGCC GCTGTCCATGAACGGACACG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE-Like; Pilus Assembly ATPase CpaE; Response Regulator Receiver; Flp Pilus Assembly Protein ATPase CpaE; Response Regulator; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Response Receiver ATPase CpaE; Cobyrinic Acid Ac-Diamide Synthase; Flp Pilus Assembly ATPase CpaE; Two-Component Response Regulator; CtpF Protein; Flp Pilus Assembly ATPase; Septum Site-Determining Protein; Cobyrinic Acid A C-Diamide Synthase; Chromosome Partitioning ATPase; Type II Secretion System Protein; AAA ATPase; CpaE2 Pilus Assembly Protein; ParaA Family ATPase; Component Of Type IV Pilus; Septum Site-Determining Protein MinD; Flp Pilus Assembly ATPase Cpae-Like
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MLKILIASEDGERLADLARLVAAAGSYQVMHLHAAPGSLSTHACQLRGADALIIDQPSGGPSQMLSIELLRQQFADLPCI LVTQTQERDDLIRALRAGVSDILTWPLERAQLTTALTRLETNHTPRTREEARVIAFISSKGGAGSSFIASNVGYTLAAHE HKRVLLIDLNTQFSDTHFLVSNKTPPATLSEVCAQVDRLDDAFLEACLTRVAKDFDVLAGASDPIKAGEIKKDKIEYVLS LVSPIYDFILVDVGQAINPLSIAVLDHCDQICVVVQPTIAFARTGRRLLDILHGLHYPPEKLRILVNRHGKRDELPRSTL EQVFGQKLFHVLPEDAAAVDDSICQGMPIAQHHRSSAMTKALMALGNVFATARENDRHASQEKGFSLSKFFSRAKTSSPN IA
Sequences:
>Translated_402_residues MLKILIASEDGERLADLARLVAAAGSYQVMHLHAAPGSLSTHACQLRGADALIIDQPSGGPSQMLSIELLRQQFADLPCI LVTQTQERDDLIRALRAGVSDILTWPLERAQLTTALTRLETNHTPRTREEARVIAFISSKGGAGSSFIASNVGYTLAAHE HKRVLLIDLNTQFSDTHFLVSNKTPPATLSEVCAQVDRLDDAFLEACLTRVAKDFDVLAGASDPIKAGEIKKDKIEYVLS LVSPIYDFILVDVGQAINPLSIAVLDHCDQICVVVQPTIAFARTGRRLLDILHGLHYPPEKLRILVNRHGKRDELPRSTL EQVFGQKLFHVLPEDAAAVDDSICQGMPIAQHHRSSAMTKALMALGNVFATARENDRHASQEKGFSLSKFFSRAKTSSPN IA >Mature_402_residues MLKILIASEDGERLADLARLVAAAGSYQVMHLHAAPGSLSTHACQLRGADALIIDQPSGGPSQMLSIELLRQQFADLPCI LVTQTQERDDLIRALRAGVSDILTWPLERAQLTTALTRLETNHTPRTREEARVIAFISSKGGAGSSFIASNVGYTLAAHE HKRVLLIDLNTQFSDTHFLVSNKTPPATLSEVCAQVDRLDDAFLEACLTRVAKDFDVLAGASDPIKAGEIKKDKIEYVLS LVSPIYDFILVDVGQAINPLSIAVLDHCDQICVVVQPTIAFARTGRRLLDILHGLHYPPEKLRILVNRHGKRDELPRSTL EQVFGQKLFHVLPEDAAAVDDSICQGMPIAQHHRSSAMTKALMALGNVFATARENDRHASQEKGFSLSKFFSRAKTSSPN IA
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43946; Mature: 43946
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKILIASEDGERLADLARLVAAAGSYQVMHLHAAPGSLSTHACQLRGADALIIDQPSGG CEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHEEECCCCEEEEECCCCC PSQMLSIELLRQQFADLPCILVTQTQERDDLIRALRAGVSDILTWPLERAQLTTALTRLE HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHH TNHTPRTREEARVIAFISSKGGAGSSFIASNVGYTLAAHEHKRVLLIDLNTQFSDTHFLV CCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEE SNKTPPATLSEVCAQVDRLDDAFLEACLTRVAKDFDVLAGASDPIKAGEIKKDKIEYVLS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LVSPIYDFILVDVGQAINPLSIAVLDHCDQICVVVQPTIAFARTGRRLLDILHGLHYPPE HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCCCHH KLRILVNRHGKRDELPRSTLEQVFGQKLFHVLPEDAAAVDDSICQGMPIAQHHRSSAMTK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH ALMALGNVFATARENDRHASQEKGFSLSKFFSRAKTSSPNIA HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MLKILIASEDGERLADLARLVAAAGSYQVMHLHAAPGSLSTHACQLRGADALIIDQPSGG CEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHEEECCCCEEEEECCCCC PSQMLSIELLRQQFADLPCILVTQTQERDDLIRALRAGVSDILTWPLERAQLTTALTRLE HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHH TNHTPRTREEARVIAFISSKGGAGSSFIASNVGYTLAAHEHKRVLLIDLNTQFSDTHFLV CCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEE SNKTPPATLSEVCAQVDRLDDAFLEACLTRVAKDFDVLAGASDPIKAGEIKKDKIEYVLS ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH LVSPIYDFILVDVGQAINPLSIAVLDHCDQICVVVQPTIAFARTGRRLLDILHGLHYPPE HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCCCHH KLRILVNRHGKRDELPRSTLEQVFGQKLFHVLPEDAAAVDDSICQGMPIAQHHRSSAMTK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH ALMALGNVFATARENDRHASQEKGFSLSKFFSRAKTSSPNIA HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA