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The map label for this gene is 187927683

Identifier: 187927683

GI number: 187927683

Start: 621275

End: 622252

Strand: Reverse

Name: 187927683

Synonym: Rpic_0587

Alternate gene names: NA

Gene position: 622252-621275 (Counterclockwise)

Preceding gene: 187927684

Following gene: 187927682

Centisome position: 15.78

GC content: 61.25

Gene sequence:

>978_bases
ATGAACGAAATCTTCTACGCGTTCGCAATCCTGCTGTTCGCGGCCGTCGTACTCTGCATCGAGGGGGTCTACCAGTGGTG
GAACAACTACCACGGCCCCGAGGCCAAGCGCGTTGATGCCCGCATCCGCGCGCTGTCCGCGGGCGGACACATCGGCACTG
AACAGCTCTCGATTCTGAAGAAACGCCTGCTGAGCGAATCGCCCCAGTTCCAGCGCTGGTTGATGAGCCTCCCCCGCGTG
AGCACGATTGACCGTTGGCTGGAGCAATCCGGCAGCGCTTGGTCGGTCGCGCAGCTCCTGGGATACACCATCCTGACTGG
CGCCGGAGTGCTGGCAGTAGGTGCGTTGCTGCCGGTCCCGTTTGGCATCGTGACGGCCTGCGCGTTGCTCATGTCTGCGC
TGCCGGTCTTGCACATCGCATCGCAGCGGCGCAAACGCCTGAAGAAGCTGGAGGCGCAGCTTCCCGACGCGGTGGACATG
ATTGCCCGTGCACTACGTGCCGGCCACTCCTTCGCCAGCGCGCTAGGCATGGTCGGGCAAGAGATTAAGGAGCCCATGGG
TCCCGAGTTCCACACTACATTCGAAGAAATCAACTACGGCGTATCGCTCGATGAAGCCTTGACCAACCTGGCCAAGCGGG
TGCCCGTCAATGACCTGCGCTACTTCGTGATTGCCGTGCTAATCCAACGCGAAAGCGGCGGCAACCTGGCGGAGATTCTC
GACACAATCGGCAACCTTGTGCGCGAGCGCCTGAAGCTGTACGACAAGATCCGCGTGCTGTCAGCCGAAGGGCGTTTGTC
GGCGTGGATTCTCGGGCTGCTGCCCTTCTGCACCGCCGGCATGATTCTCCTTGTCAATCCCGACTTCATGAAGGTGCTAT
GGACGGACCCGATGGGCCTGAAGATGATCGGCCTGGCGCTGTTCAACATGGTGATGGGCCTGATCTGGATGCGCAAGATC
ATCCGCATCCGGGTCTGA

Upstream 100 bases:

>100_bases
GAGACCTTTGACCCGCAAAGGCACTTTGAGGTTTAAAGGCTTGAAGCCAGAGCCACCACCAGTGTGGTCCAAGCGCGATC
TAGAAACGGGGGCACCCTAA

Downstream 100 bases:

>100_bases
CGGACGTGCGATATGCAGCACGGGAACCTCACAACGTGACTTCGTATTCTTGGGGGGAGGCGATCATGCAAGCGCTCTAT
TCCAATCAATATTTCATCCT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Integral Membrane Protein; Type II Secretion System F Domain; Type II Secretion System; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Flp Type Pilus Assembly Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Bacterial Type II Secretion System Protein F; Flp Pilus Assembly Protein TadC; Pilus Assembly Protein Tadb; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNEIFYAFAILLFAAVVLCIEGVYQWWNNYHGPEAKRVDARIRALSAGGHIGTEQLSILKKRLLSESPQFQRWLMSLPRV
STIDRWLEQSGSAWSVAQLLGYTILTGAGVLAVGALLPVPFGIVTACALLMSALPVLHIASQRRKRLKKLEAQLPDAVDM
IARALRAGHSFASALGMVGQEIKEPMGPEFHTTFEEINYGVSLDEALTNLAKRVPVNDLRYFVIAVLIQRESGGNLAEIL
DTIGNLVRERLKLYDKIRVLSAEGRLSAWILGLLPFCTAGMILLVNPDFMKVLWTDPMGLKMIGLALFNMVMGLIWMRKI
IRIRV

Sequences:

>Translated_325_residues
MNEIFYAFAILLFAAVVLCIEGVYQWWNNYHGPEAKRVDARIRALSAGGHIGTEQLSILKKRLLSESPQFQRWLMSLPRV
STIDRWLEQSGSAWSVAQLLGYTILTGAGVLAVGALLPVPFGIVTACALLMSALPVLHIASQRRKRLKKLEAQLPDAVDM
IARALRAGHSFASALGMVGQEIKEPMGPEFHTTFEEINYGVSLDEALTNLAKRVPVNDLRYFVIAVLIQRESGGNLAEIL
DTIGNLVRERLKLYDKIRVLSAEGRLSAWILGLLPFCTAGMILLVNPDFMKVLWTDPMGLKMIGLALFNMVMGLIWMRKI
IRIRV
>Mature_325_residues
MNEIFYAFAILLFAAVVLCIEGVYQWWNNYHGPEAKRVDARIRALSAGGHIGTEQLSILKKRLLSESPQFQRWLMSLPRV
STIDRWLEQSGSAWSVAQLLGYTILTGAGVLAVGALLPVPFGIVTACALLMSALPVLHIASQRRKRLKKLEAQLPDAVDM
IARALRAGHSFASALGMVGQEIKEPMGPEFHTTFEEINYGVSLDEALTNLAKRVPVNDLRYFVIAVLIQRESGGNLAEIL
DTIGNLVRERLKLYDKIRVLSAEGRLSAWILGLLPFCTAGMILLVNPDFMKVLWTDPMGLKMIGLALFNMVMGLIWMRKI
IRIRV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36184; Mature: 36184

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA