Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927539
Identifier: 187927539
GI number: 187927539
Start: 469794
End: 470816
Strand: Direct
Name: 187927539
Synonym: Rpic_0439
Alternate gene names: NA
Gene position: 469794-470816 (Clockwise)
Preceding gene: 187927537
Following gene: 187927540
Centisome position: 11.92
GC content: 53.76
Gene sequence:
>1023_bases ATGGATATCAAGTACGCGTTCTGGAACAACAAAGGGGGCACGGGCAAGACAAGCTTGGCCTTCCAGTCAATTGTGCGATA TGCGGAGAAGCACTCCAAGAAGCGGATCTTGGCAATTGACATGTGCCCGCAGGCAAACCTGTCCGAGCTCATGCTTGGCG GTCTCAACAACAAAGGTAGCGAGAAGCTGTTAGCGCGGCAGGGGCTTGTGCCGAGGTGTAGTGTCGGCGGGTATTTCCAG CTTCGTTTGCCGTCCCCATACGCTCCGCCCAAGTTCGATGCGCACGACTTCATCACCAAACCCAACAGCTACAACGTGGG GGTACCAAGGAATGTCGATCTGGTGTGTGGTGATCCTTTGCTTGAGTTGCAAGCGAACGCAGTGAACACCCTTGCAAATA ACCAGATTCCGGGTACCAACCCCTGGATTGCGGTCATTGACTGGCTCAAGGATTTTCTCGATCAGGTTGAGGCTGAGTAC GACGTGGTCTTCATCGACTGCAATCCCAGCTTCTCGCTATACACGCAGATCGCGTTGTCCACGGCGGATCGCATCGTACT GCCGGTCATGGCGGACGATTCCTCTCGCCGGGCGATCCAGAATGCGTTCTCTTTGATCTACGGTCTGAAGTTGCCGTCAG AGATCTACGCAGCCTATGCCTTTGCCACCAAGTTGAAGGAAGCGCATCGGCCTCTGCCCAAGATTCATCTTATCGTCAAG AATCGTCTGACCCAGTATATGGGGGCTGCGTCAGCATACGCCGCCGTGTTGCATGCCATCGAGAGAGACGTTGACAAGCT GCTGAAGTCGAACCCAGAAATCTTTGGGTTCAAGAAGCTGGAATCAGGCTTTGTAGAGGTACGTGACTTCCAGACTACGG GGGTCGTTGCGTTCGCGAAGGGCTTGCCGTTCTCAAAGTTGCCAGTGGGAAAGCAATCGATCAGTGGCCATCGCGTTCAG GTCAAAGAGGACTATTTGCTAAACGCTCAGAAAGCAATGGATGGGCTGGTAGCAAGTCTATAG
Upstream 100 bases:
>100_bases TGCCCACAACGATGAAGTGCGTGTGCGGACCTTGCGGTGTCCAATTTGGACGCTATAATGTCCATGTGGGACGAATTGGC GTCCCGTTGGGGCAAACCGC
Downstream 100 bases:
>100_bases CCCAGAATTTCCCGCCCGGAGCACTTTATGGCAGACGAATACCACTATCCACCAGATCTATTTGATTTGCTCGTTGATGC GTTGGGACGGCTCAACAAAA
Product: ATPase
Products: NA
Alternate protein names: ATPase; ATPase Domain Protein; Chromosome Partitioning ATPase
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MDIKYAFWNNKGGTGKTSLAFQSIVRYAEKHSKKRILAIDMCPQANLSELMLGGLNNKGSEKLLARQGLVPRCSVGGYFQ LRLPSPYAPPKFDAHDFITKPNSYNVGVPRNVDLVCGDPLLELQANAVNTLANNQIPGTNPWIAVIDWLKDFLDQVEAEY DVVFIDCNPSFSLYTQIALSTADRIVLPVMADDSSRRAIQNAFSLIYGLKLPSEIYAAYAFATKLKEAHRPLPKIHLIVK NRLTQYMGAASAYAAVLHAIERDVDKLLKSNPEIFGFKKLESGFVEVRDFQTTGVVAFAKGLPFSKLPVGKQSISGHRVQ VKEDYLLNAQKAMDGLVASL
Sequences:
>Translated_340_residues MDIKYAFWNNKGGTGKTSLAFQSIVRYAEKHSKKRILAIDMCPQANLSELMLGGLNNKGSEKLLARQGLVPRCSVGGYFQ LRLPSPYAPPKFDAHDFITKPNSYNVGVPRNVDLVCGDPLLELQANAVNTLANNQIPGTNPWIAVIDWLKDFLDQVEAEY DVVFIDCNPSFSLYTQIALSTADRIVLPVMADDSSRRAIQNAFSLIYGLKLPSEIYAAYAFATKLKEAHRPLPKIHLIVK NRLTQYMGAASAYAAVLHAIERDVDKLLKSNPEIFGFKKLESGFVEVRDFQTTGVVAFAKGLPFSKLPVGKQSISGHRVQ VKEDYLLNAQKAMDGLVASL >Mature_340_residues MDIKYAFWNNKGGTGKTSLAFQSIVRYAEKHSKKRILAIDMCPQANLSELMLGGLNNKGSEKLLARQGLVPRCSVGGYFQ LRLPSPYAPPKFDAHDFITKPNSYNVGVPRNVDLVCGDPLLELQANAVNTLANNQIPGTNPWIAVIDWLKDFLDQVEAEY DVVFIDCNPSFSLYTQIALSTADRIVLPVMADDSSRRAIQNAFSLIYGLKLPSEIYAAYAFATKLKEAHRPLPKIHLIVK NRLTQYMGAASAYAAVLHAIERDVDKLLKSNPEIFGFKKLESGFVEVRDFQTTGVVAFAKGLPFSKLPVGKQSISGHRVQ VKEDYLLNAQKAMDGLVASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37596; Mature: 37596
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIKYAFWNNKGGTGKTSLAFQSIVRYAEKHSKKRILAIDMCPQANLSELMLGGLNNKGS CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCH EKLLARQGLVPRCSVGGYFQLRLPSPYAPPKFDAHDFITKPNSYNVGVPRNVDLVCGDPL HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCH LELQANAVNTLANNQIPGTNPWIAVIDWLKDFLDQVEAEYDVVFIDCNPSFSLYTQIALS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH TADRIVLPVMADDSSRRAIQNAFSLIYGLKLPSEIYAAYAFATKLKEAHRPLPKIHLIVK CCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHH NRLTQYMGAASAYAAVLHAIERDVDKLLKSNPEIFGFKKLESGFVEVRDFQTTGVVAFAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEECCCCCEEEEEC GLPFSKLPVGKQSISGHRVQVKEDYLLNAQKAMDGLVASL CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDIKYAFWNNKGGTGKTSLAFQSIVRYAEKHSKKRILAIDMCPQANLSELMLGGLNNKGS CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCH EKLLARQGLVPRCSVGGYFQLRLPSPYAPPKFDAHDFITKPNSYNVGVPRNVDLVCGDPL HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCH LELQANAVNTLANNQIPGTNPWIAVIDWLKDFLDQVEAEYDVVFIDCNPSFSLYTQIALS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH TADRIVLPVMADDSSRRAIQNAFSLIYGLKLPSEIYAAYAFATKLKEAHRPLPKIHLIVK CCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHH NRLTQYMGAASAYAAVLHAIERDVDKLLKSNPEIFGFKKLESGFVEVRDFQTTGVVAFAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEECCCCCEEEEEC GLPFSKLPVGKQSISGHRVQVKEDYLLNAQKAMDGLVASL CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA