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The map label for this gene is 187927537

Identifier: 187927537

GI number: 187927537

Start: 466461

End: 466955

Strand: Direct

Name: 187927537

Synonym: Rpic_0437

Alternate gene names: NA

Gene position: 466461-466955 (Clockwise)

Preceding gene: 187927536

Following gene: 187927539

Centisome position: 11.83

GC content: 56.97

Gene sequence:

>495_bases
ATGCGCGTCTTGCAGCCACTCGGCATTGTTATCAGGCTCCAGAGTCCACAGAAGTATCTCGCCTTCGAAGAAAGCCAACA
ACGCTCCGCCTTCTTGATGAAACCCGATGTGACCGCCTCACGGGACGGGCGGGTCAGGTGGATTTTGGATACGAAGTGGA
AGGAGCTCTCGGCAGGTGAAGCCAAGGAAGGCGTGGCACAGTCCGACCTTTACCAAATGTATGCATATGCCAGCTGCTAC
AACTGCTCCGAGGTTGTGCTTCTGTATCCGCATCACGGCGCTCTTGGTCAAAGTGCTGGTGTACGGGCCACTTACTTGCT
GAATCCCTGGGCAGAACGTGCGAGCCAAGAGCCGGCGCGGCGGGTGAGAGTGGCGACGATGGACTTAGCTGACCTCAAGA
CCGTTCCTAGGCAACTTGAACGGATTGTGCTGGACTATAACGCGCAGGCACCGGTCGAGATTGCCGATGGTGTTCCAAGT
CACGCGTTGCGCTAG

Upstream 100 bases:

>100_bases
AATCAAAAATCGTTGCATCTCGTTCCCGTAGGCGTCGACCATTGGCGTCTAGTTTTTGAACTTTCGATGGGAGGACAGAT
GAACGAAACAGCAGTGGACT

Downstream 100 bases:

>100_bases
TATGGACCGGCGCGTCATAGTGACGCACAGCCGGCCCTCTGCGGTTCTTAAGCATGTGCTTCGGGACGAAAATCCCCCAA
CTGCCGTCGGTACGCTTGTA

Product: McrBC 5-methylcytosine restriction system component-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRVLQPLGIVIRLQSPQKYLAFEESQQRSAFLMKPDVTASRDGRVRWILDTKWKELSAGEAKEGVAQSDLYQMYAYASCY
NCSEVVLLYPHHGALGQSAGVRATYLLNPWAERASQEPARRVRVATMDLADLKTVPRQLERIVLDYNAQAPVEIADGVPS
HALR

Sequences:

>Translated_164_residues
MRVLQPLGIVIRLQSPQKYLAFEESQQRSAFLMKPDVTASRDGRVRWILDTKWKELSAGEAKEGVAQSDLYQMYAYASCY
NCSEVVLLYPHHGALGQSAGVRATYLLNPWAERASQEPARRVRVATMDLADLKTVPRQLERIVLDYNAQAPVEIADGVPS
HALR
>Mature_164_residues
MRVLQPLGIVIRLQSPQKYLAFEESQQRSAFLMKPDVTASRDGRVRWILDTKWKELSAGEAKEGVAQSDLYQMYAYASCY
NCSEVVLLYPHHGALGQSAGVRATYLLNPWAERASQEPARRVRVATMDLADLKTVPRQLERIVLDYNAQAPVEIADGVPS
HALR

Specific function: Unknown

COG id: COG4268

COG function: function code V; McrBC 5-methylcytosine restriction system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18444; Mature: 18444

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLQPLGIVIRLQSPQKYLAFEESQQRSAFLMKPDVTASRDGRVRWILDTKWKELSAGE
CCCCCCCCEEEEECCCCHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AKEGVAQSDLYQMYAYASCYNCSEVVLLYPHHGALGQSAGVRATYLLNPWAERASQEPAR
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHCCCHHH
RVRVATMDLADLKTVPRQLERIVLDYNAQAPVEIADGVPSHALR
HEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MRVLQPLGIVIRLQSPQKYLAFEESQQRSAFLMKPDVTASRDGRVRWILDTKWKELSAGE
CCCCCCCCEEEEECCCCHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
AKEGVAQSDLYQMYAYASCYNCSEVVLLYPHHGALGQSAGVRATYLLNPWAERASQEPAR
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHCCCHHH
RVRVATMDLADLKTVPRQLERIVLDYNAQAPVEIADGVPSHALR
HEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA