Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927536
Identifier: 187927536
GI number: 187927536
Start: 465455
End: 465844
Strand: Direct
Name: 187927536
Synonym: Rpic_0436
Alternate gene names: NA
Gene position: 465455-465844 (Clockwise)
Preceding gene: 187927534
Following gene: 187927537
Centisome position: 11.81
GC content: 59.74
Gene sequence:
>390_bases ATGGACGTACAGCAACTTGTTTCCGAATTCCTTGCTTCTGAACAGGGGAGTCAGGCTACCCAAGCCTTGGCGGCTCGGGG CATCAGCACGGATGATGCCCAGGCGATGCTGAGCCAGGCGGCAGAGACAGCGCACGCCCACGTTGAAGAACAGAATGCTG GCCTGATGGGCGAGCATGGTGGCAGAAGCTTTTTTGCAGCCTTCGCCGCAGGCCTCGTTCGGGGCGACGGCTTTTTCAAG TCGCTAGTAGAGGGCGGGGAGGGTATTCTGACCGGTCGCGTCGCGGAATCCTTGGCAGGAAAAATGGGTATTGACCCGTC CATCGCGTCGACTGTGGCCGCAGCCGCTACTCCGTATCTCGTAGCGTTTCTGAAGGAGCGTCTCGCCTGA
Upstream 100 bases:
>100_bases TCAGGGTTGACGGAGCTTCCACGGTTCTTTCTCACGCATCGATGACGGCGGCGGTCGCATGTCGGCCGCCTCAACGCCAT AACCCTGGGAGAGCTTTCCC
Downstream 100 bases:
>100_bases GAAGAGCCTTTGTCGCTCTGGCAGCGTGGAGGGTTGGGGGCGGCCGGTTCAGGCCCGTTCGATGGATTAGCGCAACCTCA CGGCGCGGCAATCGCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MDVQQLVSEFLASEQGSQATQALAARGISTDDAQAMLSQAAETAHAHVEEQNAGLMGEHGGRSFFAAFAAGLVRGDGFFK SLVEGGEGILTGRVAESLAGKMGIDPSIASTVAAAATPYLVAFLKERLA
Sequences:
>Translated_129_residues MDVQQLVSEFLASEQGSQATQALAARGISTDDAQAMLSQAAETAHAHVEEQNAGLMGEHGGRSFFAAFAAGLVRGDGFFK SLVEGGEGILTGRVAESLAGKMGIDPSIASTVAAAATPYLVAFLKERLA >Mature_129_residues MDVQQLVSEFLASEQGSQATQALAARGISTDDAQAMLSQAAETAHAHVEEQNAGLMGEHGGRSFFAAFAAGLVRGDGFFK SLVEGGEGILTGRVAESLAGKMGIDPSIASTVAAAATPYLVAFLKERLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13227; Mature: 13227
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQQLVSEFLASEQGSQATQALAARGISTDDAQAMLSQAAETAHAHVEEQNAGLMGEHG CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRSFFAAFAAGLVRGDGFFKSLVEGGEGILTGRVAESLAGKMGIDPSIASTVAAAATPYL CHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VAFLKERLA HHHHHHHCC >Mature Secondary Structure MDVQQLVSEFLASEQGSQATQALAARGISTDDAQAMLSQAAETAHAHVEEQNAGLMGEHG CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GRSFFAAFAAGLVRGDGFFKSLVEGGEGILTGRVAESLAGKMGIDPSIASTVAAAATPYL CHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VAFLKERLA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA