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The map label for this gene is rdoA [H]

Identifier: 187927523

GI number: 187927523

Start: 451546

End: 452580

Strand: Direct

Name: rdoA [H]

Synonym: Rpic_0421

Alternate gene names: 187927523

Gene position: 451546-452580 (Clockwise)

Preceding gene: 187927522

Following gene: 187927525

Centisome position: 11.45

GC content: 66.76

Gene sequence:

>1035_bases
ATGCACGACGATGGCCCACCCGCATCAGTTGACGCGCCCTACGACGGCCTGACGCCCGACAGCATCCTCGATGCGCTGGC
GCAGGTCGGGCTGATGCCGGACGGCCGCATGTTCGCGCTCAACAGCTACGAGAACCGCGTCTACCAGGCCGGCGTGGAAG
ATAGCGCGCCGGTGGTGGTCAAGTTCTACCGCCCGGGCCGCTGGACCGATGCGCAGATCGTCGAGGAACACGCCTTCACG
GCAGAACTCGCAGCGGCGGAGATCCCCGTGGTCGCGCCGCTGGAAATCGACGACCGCACGCTGCACGCGTTCGAGCGTTG
GCACTTCGCGGTCTTCCCGCGTTGCGCAGGCCGCGTGCCGGCCATCGACCAAGACCACACGCTTGAGTGGATGGGCCGCT
TCCTTGGCCGCATCCACGTCGTGGGTGCGCGGCGGCCGTTCGTGGCCAGGCCCGCACTCGACATCGACACCTTCGGCGTG
CAATCGCGCGACTGGCTGCTCGAACACGATTTCATCCCGCCCGATTTGTTGCCGGCTTGGCGCAGCGTGGCTGACGCCGC
ACTCGACGGCGTGCGCCGCTGCTACGACCGCGCAGGCGACGTTTCATTGCTGCGCCTGCACGGCGATTGCCACGCCTCGA
ACGTGCTCTGGATCGAAGAGGCCGACGCCAAGCAGGGCGATCCACTGCGCAGCGCCGGTCCGCATTTCGTCGACTTTGAC
GACAGCCGCACCGGCCCGGCCGTGCAGGATCTGTGGATGCTGCTCTCGGGCGATCGCGCGTCGATGCAATCGCAGCTCGC
CAGCCTGCTGGCCGGGTACGAGGACTTCTGCGAATTCGACACGCGCGAGCTATATCTGGTCGAAGCGCTGCGCACGCTGC
GCTTGCTGCACTACAGCGCCTGGTTGGCGCGTCGCTGGAACGATCCGGCGTTTCCTGCAGCGTTTCCGTGGTTCAACACG
CAACGCTACTGGCAGGACCGGGTGTTGGAGTTGCGCGAGCAGATCGCGCTGTTGGACGAACCGCCGCTCTGGTGA

Upstream 100 bases:

>100_bases
CCGCGCAGCCGGCCCACAAGGGACAGCCGGCCAAGCAGCCGTTCAATGGTTTGTTCGCCAAGGCGGCTGCGTTGCTCGGC
GGCCGTAAAGCCTGACGTCC

Downstream 100 bases:

>100_bases
AACCGAGCGGCGGTTTTTCTTTGAGGCTTGGGCTTAGGCGAACTTGCCGGCCTGGAAGTCCCGCACGGCCTGGAAGATCT
CTTCTTGCGTGTTCATCACG

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MHDDGPPASVDAPYDGLTPDSILDALAQVGLMPDGRMFALNSYENRVYQAGVEDSAPVVVKFYRPGRWTDAQIVEEHAFT
AELAAAEIPVVAPLEIDDRTLHAFERWHFAVFPRCAGRVPAIDQDHTLEWMGRFLGRIHVVGARRPFVARPALDIDTFGV
QSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGDVSLLRLHGDCHASNVLWIEEADAKQGDPLRSAGPHFVDFD
DSRTGPAVQDLWMLLSGDRASMQSQLASLLAGYEDFCEFDTRELYLVEALRTLRLLHYSAWLARRWNDPAFPAAFPWFNT
QRYWQDRVLELREQIALLDEPPLW

Sequences:

>Translated_344_residues
MHDDGPPASVDAPYDGLTPDSILDALAQVGLMPDGRMFALNSYENRVYQAGVEDSAPVVVKFYRPGRWTDAQIVEEHAFT
AELAAAEIPVVAPLEIDDRTLHAFERWHFAVFPRCAGRVPAIDQDHTLEWMGRFLGRIHVVGARRPFVARPALDIDTFGV
QSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGDVSLLRLHGDCHASNVLWIEEADAKQGDPLRSAGPHFVDFD
DSRTGPAVQDLWMLLSGDRASMQSQLASLLAGYEDFCEFDTRELYLVEALRTLRLLHYSAWLARRWNDPAFPAAFPWFNT
QRYWQDRVLELREQIALLDEPPLW
>Mature_344_residues
MHDDGPPASVDAPYDGLTPDSILDALAQVGLMPDGRMFALNSYENRVYQAGVEDSAPVVVKFYRPGRWTDAQIVEEHAFT
AELAAAEIPVVAPLEIDDRTLHAFERWHFAVFPRCAGRVPAIDQDHTLEWMGRFLGRIHVVGARRPFVARPALDIDTFGV
QSRDWLLEHDFIPPDLLPAWRSVADAALDGVRRCYDRAGDVSLLRLHGDCHASNVLWIEEADAKQGDPLRSAGPHFVDFD
DSRTGPAVQDLWMLLSGDRASMQSQLASLLAGYEDFCEFDTRELYLVEALRTLRLLHYSAWLARRWNDPAFPAAFPWFNT
QRYWQDRVLELREQIALLDEPPLW

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=330, Percent_Identity=44.2424242424242, Blast_Score=286, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39033; Mature: 39033

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDDGPPASVDAPYDGLTPDSILDALAQVGLMPDGRMFALNSYENRVYQAGVEDSAPVVV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHEECCCCCCCCEEE
KFYRPGRWTDAQIVEEHAFTAELAAAEIPVVAPLEIDDRTLHAFERWHFAVFPRCAGRVP
EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHEECHHHCCCCC
AIDQDHTLEWMGRFLGRIHVVGARRPFVARPALDIDTFGVQSRDWLLEHDFIPPDLLPAW
CCCCCCHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHH
RSVADAALDGVRRCYDRAGDVSLLRLHGDCHASNVLWIEEADAKQGDPLRSAGPHFVDFD
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECC
DSRTGPAVQDLWMLLSGDRASMQSQLASLLAGYEDFCEFDTRELYLVEALRTLRLLHYSA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
WLARRWNDPAFPAAFPWFNTQRYWQDRVLELREQIALLDEPPLW
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHDDGPPASVDAPYDGLTPDSILDALAQVGLMPDGRMFALNSYENRVYQAGVEDSAPVVV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHEECCCCCCCCEEE
KFYRPGRWTDAQIVEEHAFTAELAAAEIPVVAPLEIDDRTLHAFERWHFAVFPRCAGRVP
EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHEECHHHCCCCC
AIDQDHTLEWMGRFLGRIHVVGARRPFVARPALDIDTFGVQSRDWLLEHDFIPPDLLPAW
CCCCCCHHHHHHHHHHHEEEEECCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHH
RSVADAALDGVRRCYDRAGDVSLLRLHGDCHASNVLWIEEADAKQGDPLRSAGPHFVDFD
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECC
DSRTGPAVQDLWMLLSGDRASMQSQLASLLAGYEDFCEFDTRELYLVEALRTLRLLHYSA
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
WLARRWNDPAFPAAFPWFNTQRYWQDRVLELREQIALLDEPPLW
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA