BacMap

Definition	Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession	NC_010682
Length	3,942,557

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The map label for this gene is rhlE [H]

Identifier: 187927522

GI number: 187927522

Start: 449858

End: 451540

Strand: Direct

Name: rhlE [H]

Synonym: Rpic_0420

Alternate gene names: 187927522

Gene position: 449858-451540 (Clockwise)

Preceding gene: 187927497

Following gene: 187927523

Centisome position: 11.41

GC content: 67.2

Gene sequence:

>1683_bases
ATGTCGTTTTCCGAACTCGGCTTGTCAGACAAGCTGGTACGTGCCGTGGCCGAACTCGGCTACGCAGAACCTACTCCAAT
TCAACGCCAGGCCATCCCCGCCATTCTCAGGGGAGGTGACCTGCTCGCCGGTGCTCAGACCGGCACCGGCAAGACCGCCG
GTTTCACGCTGCCGCTGCTGCACCGCCTGTCTGCGGCGCAACCTAACAAGGTGCAGACGCCGCAGGGCATGCGCTTCCCG
ATCCGTGCGCTGGTGCTGACGCCCACGCGTGAACTTGCCGCGCAAGTTGAAGAAAGCGTGCGCGCCTATGGCAAATACCT
GCCGCTGAAGTCCATGGTGATGTTCGGCGGCGTCGGCATCAACCCGCAGATCGATGCGCTCAAGCGCGGTGTCGATATCG
TCGTGGCCACGCCGGGCCGCCTGCTCGACCACGTTGGCCAGCGCACCATCGACCTGTCGCACATTGAATTGCTGGTGCTG
GACGAAGCCGATCGTATGCTGGACATGGGCTTCATCCACGACATCCGCAAGATCCTCAACATCCTGCCGGCGAAGCGTCA
GAACCTGCTGTTCTCGGCAACGTTCTCCGACGACATCCGCGAACTGGCCGACCGCCTGCTCGACAAGCCGGCGCTGATTG
AAGTCGCGCGCCGCAACACGACGGCCGAGACGGTCGAGCAGCGCATCTACCCGGTCGACCGCGAGCGCAAGCGCGAACTG
CTTGCCAAGCTCGTGCGCGACAACGACTGGCACCAGGTGCTGGTGTTCACGCGCACCAAGCACGGCGCGAACCGCCTGGC
CGAGCAGCTCACGCGCGACGGCATTCCCGCTCTGGCCATCCACGGCAACAAGAGCCAATCGGCGCGCACGCGTGCGCTGA
CGGAATTCAAGGCTGGGACGCTGCGCGTGCTGGTTGCCACCGACATCGCCGCGCGCGGTATCGACATCGACCAACTGCCG
CACGTGGTCAACTTCGACCTGCCGAACGTGCCGGAAGACTACGTGCACCGTATCGGCCGCACGGGCCGCGCGGGTGCGCA
GGGCGAGGCGATCTCGCTGGTCTGCGTGGACGAGCATGGTTTGCTGCGCGACATTGAACGCCTCATCAAGCGTGAGCTGC
CGCGTACCGTGCTGGAACGTTTCGAGCCCGACCCGACCATCGCGGCGGAGCCGATTCCGAACGGGCGCAACCCGGCGGGC
CGCGGCGGCAACGCGCGCGGTGGCCGCCCGGGCGGTGGCCGCAGCCAGCAGCCTCGCCAGGCCAGCGGCAACGCTGCCCC
GCGCGAGCCGCGGGCACCGCGTGAGCCTCGCGAACCGCGTCGCGAGTCGAGCGGCAACGGTCAAGGGCAAGGGCAGGGGC
AGAATCAAGGCCAGGGTCGCAATGGTGGCGGCAGCCGCCAGCGCCAGGCGCAAGGCCAACGCGACGGTCAAGCCGCGCCA
AAGCCGCGCAACGGCCAATCGCAAGCGCGCGGCCAGCGCCAGGTCAATGGTCAAGGCCAGGGCCAAGGCCAAGGCCAAGG
CCAAGGCAATGGACAAGGCGGGCAGGGCGGGCAGGGCGGTCAACAACGCCGTGCATCGAACACGCAAGCCGCGCAGCCGG
CCCACAAGGGACAGCCGGCCAAGCAGCCGTTCAATGGTTTGTTCGCCAAGGCGGCTGCGTTGCTCGGCGGCCGTAAAGCC
TGA

Upstream 100 bases:

>100_bases
TGCAGTCCCCGGGGTCCAGTCGCCCCGTCACCTACCCAGGCTTTGTCCACGATTGGCGCACGAACGAATGCGCGGGACAC
GCCGGTCCAATCGCTTTTCC

Downstream 100 bases:

>100_bases
CGTCCATGCACGACGATGGCCCACCCGCATCAGTTGACGCGCCCTACGACGGCCTGACGCCCGACAGCATCCTCGATGCG
CTGGCGCAGGTCGGGCTGAT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLLHRLSAAQPNKVQTPQGMRFP
IRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVL
DEADRMLDMGFIHDIRKILNILPAKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGTLRVLVATDIAARGIDIDQLP
HVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLERFEPDPTIAAEPIPNGRNPAG
RGGNARGGRPGGGRSQQPRQASGNAAPREPRAPREPREPRRESSGNGQGQGQGQNQGQGRNGGGSRQRQAQGQRDGQAAP
KPRNGQSQARGQRQVNGQGQGQGQGQGQGNGQGGQGGQGGQQRRASNTQAAQPAHKGQPAKQPFNGLFAKAAALLGGRKA

Sequences:

>Translated_560_residues
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLLHRLSAAQPNKVQTPQGMRFP
IRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVL
DEADRMLDMGFIHDIRKILNILPAKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGTLRVLVATDIAARGIDIDQLP
HVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLERFEPDPTIAAEPIPNGRNPAG
RGGNARGGRPGGGRSQQPRQASGNAAPREPRAPREPREPRRESSGNGQGQGQGQNQGQGRNGGGSRQRQAQGQRDGQAAP
KPRNGQSQARGQRQVNGQGQGQGQGQGQGNGQGGQGGQGGQQRRASNTQAAQPAHKGQPAKQPFNGLFAKAAALLGGRKA
>Mature_559_residues
SFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLLHRLSAAQPNKVQTPQGMRFPI
RALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGINPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLD
EADRMLDMGFIHDIRKILNILPAKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKRELL
AKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGTLRVLVATDIAARGIDIDQLPH
VVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHGLLRDIERLIKRELPRTVLERFEPDPTIAAEPIPNGRNPAGR
GGNARGGRPGGGRSQQPRQASGNAAPREPRAPREPREPRRESSGNGQGQGQGQNQGQGRNGGGSRQRQAQGQRDGQAAPK
PRNGQSQARGQRQVNGQGQGQGQGQGQGNGQGGQGGQGGQQRRASNTQAAQPAHKGQPAKQPFNGLFAKAAALLGGRKA

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=389, Percent_Identity=41.6452442159383, Blast_Score=280, Evalue=4e-75,
Organism=Homo sapiens, GI301171467, Length=392, Percent_Identity=41.3265306122449, Blast_Score=275, Evalue=6e-74,
Organism=Homo sapiens, GI87196351, Length=395, Percent_Identity=41.0126582278481, Blast_Score=275, Evalue=9e-74,
Organism=Homo sapiens, GI301171475, Length=395, Percent_Identity=41.0126582278481, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI224593278, Length=391, Percent_Identity=41.4322250639386, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=40.1098901098901, Blast_Score=273, Evalue=4e-73,
Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=40.1098901098901, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=40.1098901098901, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=40.1098901098901, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI169881239, Length=389, Percent_Identity=40.8740359897172, Blast_Score=269, Evalue=4e-72,
Organism=Homo sapiens, GI13514809, Length=389, Percent_Identity=40.8740359897172, Blast_Score=269, Evalue=4e-72,
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=39.0374331550802, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI41327773, Length=368, Percent_Identity=39.6739130434783, Blast_Score=264, Evalue=1e-70,
Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=41.3793103448276, Blast_Score=259, Evalue=4e-69,
Organism=Homo sapiens, GI41327771, Length=395, Percent_Identity=37.4683544303797, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI148613856, Length=375, Percent_Identity=39.2, Blast_Score=256, Evalue=5e-68,
Organism=Homo sapiens, GI38201710, Length=375, Percent_Identity=39.2, Blast_Score=256, Evalue=5e-68,
Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=39.1061452513966, Blast_Score=253, Evalue=5e-67,
Organism=Homo sapiens, GI222352149, Length=381, Percent_Identity=38.8451443569554, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI45446747, Length=368, Percent_Identity=37.5, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI45446743, Length=368, Percent_Identity=37.5, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=38.2978723404255, Blast_Score=245, Evalue=9e-65,
Organism=Homo sapiens, GI7661920, Length=380, Percent_Identity=36.3157894736842, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI51094101, Length=375, Percent_Identity=38.1333333333333, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI164419743, Length=375, Percent_Identity=38.1333333333333, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI188035877, Length=374, Percent_Identity=37.7005347593583, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI164664518, Length=372, Percent_Identity=34.9462365591398, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=36.096256684492, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI4503529, Length=381, Percent_Identity=35.6955380577428, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI83700235, Length=381, Percent_Identity=35.1706036745407, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI38327634, Length=386, Percent_Identity=33.9378238341969, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI38569505, Length=376, Percent_Identity=35.1063829787234, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI21040371, Length=359, Percent_Identity=34.2618384401114, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=34.6666666666667, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI13514831, Length=377, Percent_Identity=33.9522546419098, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI4758112, Length=359, Percent_Identity=33.7047353760446, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI18375623, Length=359, Percent_Identity=33.7047353760446, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI17505907, Length=411, Percent_Identity=32.6034063260341, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI8922886, Length=410, Percent_Identity=33.9024390243902, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI50659095, Length=371, Percent_Identity=34.2318059299191, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI6005743, Length=410, Percent_Identity=33.6585365853659, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=35.3760445682451, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=33.0687830687831, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=34.6368715083799, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI62241022, Length=393, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=31.1111111111111, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI256223453, Length=405, Percent_Identity=31.358024691358, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI62241024, Length=370, Percent_Identity=33.5135135135135, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.0291545189504, Blast_Score=166, Evalue=6e-41,
Organism=Homo sapiens, GI9966805, Length=326, Percent_Identity=32.8220858895706, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI20336298, Length=360, Percent_Identity=31.3888888888889, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI256773275, Length=384, Percent_Identity=30.46875, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI154759257, Length=438, Percent_Identity=28.0821917808219, Blast_Score=143, Evalue=5e-34,
Organism=Escherichia coli, GI1787016, Length=394, Percent_Identity=68.2741116751269, Blast_Score=548, Evalue=1e-157,
Organism=Escherichia coli, GI87082221, Length=378, Percent_Identity=42.3280423280423, Blast_Score=291, Evalue=1e-79,
Organism=Escherichia coli, GI1790214, Length=397, Percent_Identity=40.5541561712846, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI1787605, Length=342, Percent_Identity=43.2748538011696, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=41.2868632707775, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI48994977, Length=383, Percent_Identity=25.5874673629243, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71995514, Length=389, Percent_Identity=41.9023136246787, Blast_Score=279, Evalue=4e-75,
Organism=Caenorhabditis elegans, GI17510307, Length=389, Percent_Identity=41.9023136246787, Blast_Score=278, Evalue=5e-75,
Organism=Caenorhabditis elegans, GI17510309, Length=389, Percent_Identity=41.9023136246787, Blast_Score=278, Evalue=5e-75,
Organism=Caenorhabditis elegans, GI32565321, Length=393, Percent_Identity=38.676844783715, Blast_Score=278, Evalue=8e-75,
Organism=Caenorhabditis elegans, GI71995718, Length=390, Percent_Identity=41.2820512820513, Blast_Score=265, Evalue=7e-71,
Organism=Caenorhabditis elegans, GI115533224, Length=421, Percent_Identity=37.7672209026128, Blast_Score=261, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI17510559, Length=393, Percent_Identity=38.4223918575064, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI86570094, Length=358, Percent_Identity=39.9441340782123, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=38.6920980926431, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=38.4196185286104, Blast_Score=251, Evalue=8e-67,
Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=37.4677002583979, Blast_Score=247, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17555296, Length=354, Percent_Identity=38.9830508474576, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17507877, Length=393, Percent_Identity=36.8956743002545, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI71987143, Length=380, Percent_Identity=34.7368421052632, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=37.6044568245125, Blast_Score=231, Evalue=9e-61,
Organism=Caenorhabditis elegans, GI17507881, Length=415, Percent_Identity=34.9397590361446, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17507945, Length=395, Percent_Identity=38.2278481012658, Blast_Score=225, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17552114, Length=380, Percent_Identity=34.2105263157895, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=34.7945205479452, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=34.7945205479452, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17552642, Length=440, Percent_Identity=33.8636363636364, Blast_Score=215, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=35.9580052493438, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI115532546, Length=381, Percent_Identity=35.9580052493438, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=32.8690807799443, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71990816, Length=381, Percent_Identity=33.8582677165354, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17505370, Length=371, Percent_Identity=34.7708894878706, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI193208216, Length=412, Percent_Identity=30.5825242718447, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71982858, Length=356, Percent_Identity=30.6179775280899, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI193206561, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=30.9226932668329, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17508543, Length=392, Percent_Identity=29.8469387755102, Blast_Score=169, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=30.9226932668329, Blast_Score=166, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17536099, Length=401, Percent_Identity=30.9226932668329, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=32.5581395348837, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=351, Percent_Identity=31.0541310541311, Blast_Score=155, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=25.7683215130024, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17553716, Length=384, Percent_Identity=27.0833333333333, Blast_Score=149, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=32.8877005347594, Blast_Score=148, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=26.6871165644172, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71997889, Length=379, Percent_Identity=27.1767810026385, Blast_Score=130, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=25.1461988304094, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=30.2884615384615, Blast_Score=114, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI71987152, Length=113, Percent_Identity=38.9380530973451, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17565430, Length=407, Percent_Identity=24.3243243243243, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17557982, Length=378, Percent_Identity=24.6031746031746, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325138, Length=378, Percent_Identity=41.2698412698413, Blast_Score=282, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6324778, Length=397, Percent_Identity=38.2871536523929, Blast_Score=267, Evalue=3e-72,
Organism=Saccharomyces cerevisiae, GI6324217, Length=386, Percent_Identity=40.6735751295337, Blast_Score=259, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6321856, Length=381, Percent_Identity=39.3700787401575, Blast_Score=259, Evalue=8e-70,
Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=34.5013477088949, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=398, Percent_Identity=36.1809045226131, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6321360, Length=374, Percent_Identity=39.572192513369, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=363, Percent_Identity=37.7410468319559, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6323947, Length=374, Percent_Identity=33.6898395721925, Blast_Score=217, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6322912, Length=379, Percent_Identity=36.1477572559367, Blast_Score=216, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6322323, Length=379, Percent_Identity=36.1477572559367, Blast_Score=216, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6320119, Length=408, Percent_Identity=34.3137254901961, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320449, Length=426, Percent_Identity=31.4553990610329, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6319714, Length=384, Percent_Identity=32.5520833333333, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6321963, Length=388, Percent_Identity=34.5360824742268, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=34.3406593406593, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=31.9559228650138, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6321111, Length=353, Percent_Identity=30.8781869688385, Blast_Score=172, Evalue=9e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=423, Percent_Identity=29.3144208037825, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=28.4688995215311, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=362, Percent_Identity=31.767955801105, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320173, Length=225, Percent_Identity=34.2222222222222, Blast_Score=149, Evalue=8e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=26.5700483091787, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=27.6744186046512, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=492, Percent_Identity=23.9837398373984, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6321374, Length=199, Percent_Identity=29.6482412060301, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17985987, Length=404, Percent_Identity=41.0891089108911, Blast_Score=278, Evalue=7e-75,
Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=40.4494382022472, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24585582, Length=419, Percent_Identity=37.4701670644391, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=39.1891891891892, Blast_Score=266, Evalue=4e-71,
Organism=Drosophila melanogaster, GI21356161, Length=389, Percent_Identity=40.1028277634961, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24642151, Length=370, Percent_Identity=38.3783783783784, Blast_Score=263, Evalue=2e-70,
Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=37.0558375634518, Blast_Score=257, Evalue=1e-68,
Organism=Drosophila melanogaster, GI17977678, Length=398, Percent_Identity=37.6884422110553, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI28574962, Length=381, Percent_Identity=38.5826771653543, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=39.3854748603352, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=39.3854748603352, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=39.3854748603352, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=39.3854748603352, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.3258426966292, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=39.3854748603352, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=39.3854748603352, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=39.3854748603352, Blast_Score=248, Evalue=6e-66,
Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=36.745406824147, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=36.8279569892473, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24645031, Length=380, Percent_Identity=36.3157894736842, Blast_Score=241, Evalue=7e-64,
Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=39.5027624309392, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24583279, Length=422, Percent_Identity=32.7014218009479, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24583281, Length=422, Percent_Identity=32.7014218009479, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=35.054347826087, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=35.054347826087, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=35.054347826087, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=35.054347826087, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI28571808, Length=377, Percent_Identity=32.8912466843501, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI28571809, Length=377, Percent_Identity=32.8912466843501, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=38.3647798742138, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=32.5842696629214, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=32.5842696629214, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=32.5842696629214, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24642822, Length=381, Percent_Identity=31.496062992126, Blast_Score=188, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24666101, Length=482, Percent_Identity=30.2904564315353, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17647335, Length=407, Percent_Identity=30.2211302211302, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI20130173, Length=481, Percent_Identity=28.6902286902287, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI21355559, Length=394, Percent_Identity=34.7715736040609, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=29.0322580645161, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28571338, Length=448, Percent_Identity=29.9107142857143, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI18859659, Length=448, Percent_Identity=29.9107142857143, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=28.9230769230769, Blast_Score=143, Evalue=4e-34,
Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=30.5084745762712, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI17136666, Length=414, Percent_Identity=29.2270531400966, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24640164, Length=382, Percent_Identity=26.9633507853403, Blast_Score=135, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 60515; Mature: 60384

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLL
CCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH
HRLSAAQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
HHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
CCCHHHHHCCCEEEEECCHHHHHHHCCCEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHH
ILPAKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
HCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGT
HHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
EEEEEEHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCC
LLRDIERLIKRELPRTVLERFEPDPTIAAEPIPNGRNPAGRGGNARGGRPGGGRSQQPRQ
HHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASGNAAPREPRAPREPREPRRESSGNGQGQGQGQNQGQGRNGGGSRQRQAQGQRDGQAAP
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
KPRNGQSQARGQRQVNGQGQGQGQGQGQGNGQGGQGGQGGQQRRASNTQAAQPAHKGQPA
CCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
KQPFNGLFAKAAALLGGRKA
CCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILRGGDLLAGAQTGTGKTAGFTLPLL
CHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH
HRLSAAQPNKVQTPQGMRFPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
HHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
CCCHHHHHCCCEEEEECCHHHHHHHCCCEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHH
ILPAKRQNLLFSATFSDDIRELADRLLDKPALIEVARRNTTAETVEQRIYPVDRERKREL
HCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALTEFKAGT
HHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
EEEEEEHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCC
LLRDIERLIKRELPRTVLERFEPDPTIAAEPIPNGRNPAGRGGNARGGRPGGGRSQQPRQ
HHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASGNAAPREPRAPREPREPRRESSGNGQGQGQGQNQGQGRNGGGSRQRQAQGQRDGQAAP
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
KPRNGQSQARGQRQVNGQGQGQGQGQGQGNGQGGQGGQGGQQRRASNTQAAQPAHKGQPA
CCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
KQPFNGLFAKAAALLGGRKA
CCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]