Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is lnt [H]
Identifier: 187927506
GI number: 187927506
Start: 428685
End: 430196
Strand: Reverse
Name: lnt [H]
Synonym: Rpic_0403
Alternate gene names: 187927506
Gene position: 430196-428685 (Counterclockwise)
Preceding gene: 187927507
Following gene: 187927505
Centisome position: 10.91
GC content: 67.59
Gene sequence:
>1512_bases GTGCCGCTCGCGCGGCTGCGTTTCGCGATGCCGCTTGCAGCGTTGCTTGGCGTCATGCATACGCTGTCGTTTGCACCGAA CCACTGGTGGTGGCTGCAGATCCTCTCGCTCACGGGGCTGGCCGCGCTCGTGCAGCGCGCCGCGCGCCTGCGTGAAGCGG CGTGGGTCGGATATGCGTTCGGGCTCGGCTGGTTCCTGTCGGGCGTCTGGTGGCTCTATATCAGCATGCATGTCTACGGC GACATGCCGGCGTGGATGGGCGCGCTGGCAGTGCTGCTGTTTGCCGGCTACCTGGCGCTGCATCCGGCGCTGGCGGTGTG GGCATGGCAGTGGCTGACGAGACGCGGGCGGTGGTCCGGTACCGCATCCGCGCTCATATTTGGCGCGGCATGGGCCGTCA CGGAATGGCTGCGCGGCACAGTCTGGACGGGCTTCCCCTGGATCAACGGGGGCTACGCGCACACCGATGGCCCGCTGGCC GGCTACGCGCCGCTGGTGGGCGTCTACGGCATCGTGCTGATCGCCGCCGTGCTGGCTGGCCTGCTGTGCGTCGCGGCCGA GCGCCGCCTGCATTGGCTGGCGGGCATCGCGGGTGCGCTCGTGCTGGTGGCCGGCTGGCCGCTGCACGGCATTGCGTGGA CGCAGCCGGTGGGCAAGCCGATCTCCGTGCGTCTCTTGCAGGGCAACGTGCCGCAGGACGTGAAGTTCCAGCAAACCGGC ATCGAGCGCTCGCTGGAGCTGTACACCAAGATGGTCACCGAGAAGCCCGCGCAACTCGTGGTCACACCCGAGACGGCCTT CCCGATCATGATTCAGGAGATGCCGCAGGAGATCGCGCTGGCCCTCCGCACCTATGTGGATACCACCGGCTCCAGCGTGC TGTTCGGCGCCGCCAGCGAGGACTCCCGCGTCGATTACACCAACAGCGTGTTCGGCATCGGCCCGCAATTCCAGGGCGTG TACCGCTACAACAAGCACCACCTCGTGCCGTTCGGCGAGTTCATCCCCTTCGGTTTCCACTGGTTCGTCAACATGATGAA CATGCCGCTGGGCGACTTCCGGCGTGGCCTGCCCGTGCAGCCGCCCATGGCGGTGGCCGACCAGCGCGTCGCACCCAACA TCTGCTACGAAGATTTGTTTGGCGAGGAAATTGCCGCCTCGCTGCGACATGCGGATCAGCCCGCCACGATGCTCGCCAAC GTGACGAACCTGGCGTGGTTTGGCGACACGATCGCGCTGGACCAGCACCTGCAGATCTCGCGCATGCGCGCGCTGGAAAC GGGCCGTCCGATGCTGCGCGCCACCAACACGGGGGCGACCGCCGTGGTGCGGCCCGACGGCAGCGTACAGGCCCGTCTAC CGGTCTTCACGCTTGGCACATTGCAGACTGACGTGCAAGGCACGCAAGGCCTGACGCCATTCGTGCGGACCGGCAACGCG CCCGCGCTGGGCCTGGGCGCGCTGGTTCTGCTGGTGGCATTCGTGCGCCGCCGCCGGGCTTCGGCAGATTGA
Upstream 100 bases:
>100_bases GCCACAGCCGACACCTCTGGTTCTCACCCCGCCTGATCCCTCCGTGCCCGCTCAGTTCTCTTCCCCTGCCGCACCATCCC GTCGGCAGGATGCCCAAGCT
Downstream 100 bases:
>100_bases TCGTTCAGCGTCCGGAGGGCTTTCGAGCCACTTTCCGGAGTCGCTGACAAAAAACGCTAAAATTCAACGTTTTACGGCGG GCAGGGAGCCAGGCGCTTCC
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MPLARLRFAMPLAALLGVMHTLSFAPNHWWWLQILSLTGLAALVQRAARLREAAWVGYAFGLGWFLSGVWWLYISMHVYG DMPAWMGALAVLLFAGYLALHPALAVWAWQWLTRRGRWSGTASALIFGAAWAVTEWLRGTVWTGFPWINGGYAHTDGPLA GYAPLVGVYGIVLIAAVLAGLLCVAAERRLHWLAGIAGALVLVAGWPLHGIAWTQPVGKPISVRLLQGNVPQDVKFQQTG IERSLELYTKMVTEKPAQLVVTPETAFPIMIQEMPQEIALALRTYVDTTGSSVLFGAASEDSRVDYTNSVFGIGPQFQGV YRYNKHHLVPFGEFIPFGFHWFVNMMNMPLGDFRRGLPVQPPMAVADQRVAPNICYEDLFGEEIAASLRHADQPATMLAN VTNLAWFGDTIALDQHLQISRMRALETGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQTDVQGTQGLTPFVRTGNA PALGLGALVLLVAFVRRRRASAD
Sequences:
>Translated_503_residues MPLARLRFAMPLAALLGVMHTLSFAPNHWWWLQILSLTGLAALVQRAARLREAAWVGYAFGLGWFLSGVWWLYISMHVYG DMPAWMGALAVLLFAGYLALHPALAVWAWQWLTRRGRWSGTASALIFGAAWAVTEWLRGTVWTGFPWINGGYAHTDGPLA GYAPLVGVYGIVLIAAVLAGLLCVAAERRLHWLAGIAGALVLVAGWPLHGIAWTQPVGKPISVRLLQGNVPQDVKFQQTG IERSLELYTKMVTEKPAQLVVTPETAFPIMIQEMPQEIALALRTYVDTTGSSVLFGAASEDSRVDYTNSVFGIGPQFQGV YRYNKHHLVPFGEFIPFGFHWFVNMMNMPLGDFRRGLPVQPPMAVADQRVAPNICYEDLFGEEIAASLRHADQPATMLAN VTNLAWFGDTIALDQHLQISRMRALETGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQTDVQGTQGLTPFVRTGNA PALGLGALVLLVAFVRRRRASAD >Mature_502_residues PLARLRFAMPLAALLGVMHTLSFAPNHWWWLQILSLTGLAALVQRAARLREAAWVGYAFGLGWFLSGVWWLYISMHVYGD MPAWMGALAVLLFAGYLALHPALAVWAWQWLTRRGRWSGTASALIFGAAWAVTEWLRGTVWTGFPWINGGYAHTDGPLAG YAPLVGVYGIVLIAAVLAGLLCVAAERRLHWLAGIAGALVLVAGWPLHGIAWTQPVGKPISVRLLQGNVPQDVKFQQTGI ERSLELYTKMVTEKPAQLVVTPETAFPIMIQEMPQEIALALRTYVDTTGSSVLFGAASEDSRVDYTNSVFGIGPQFQGVY RYNKHHLVPFGEFIPFGFHWFVNMMNMPLGDFRRGLPVQPPMAVADQRVAPNICYEDLFGEEIAASLRHADQPATMLANV TNLAWFGDTIALDQHLQISRMRALETGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQTDVQGTQGLTPFVRTGNAP ALGLGALVLLVAFVRRRRASAD
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=515, Percent_Identity=36.504854368932, Blast_Score=292, Evalue=3e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 55149; Mature: 55018
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLARLRFAMPLAALLGVMHTLSFAPNHWWWLQILSLTGLAALVQRAARLREAAWVGYAF CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGWFLSGVWWLYISMHVYGDMPAWMGALAVLLFAGYLALHPALAVWAWQWLTRRGRWSG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TASALIFGAAWAVTEWLRGTVWTGFPWINGGYAHTDGPLAGYAPLVGVYGIVLIAAVLAG CHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LLCVAAERRLHWLAGIAGALVLVAGWPLHGIAWTQPVGKPISVRLLQGNVPQDVKFQQTG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCHHHHH IERSLELYTKMVTEKPAQLVVTPETAFPIMIQEMPQEIALALRTYVDTTGSSVLFGAASE HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC DSRVDYTNSVFGIGPQFQGVYRYNKHHLVPFGEFIPFGFHWFVNMMNMPLGDFRRGLPVQ CCCCCCCCCEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCC PPMAVADQRVAPNICYEDLFGEEIAASLRHADQPATMLANVTNLAWFGDTIALDQHLQIS CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHH RMRALETGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQTDVQGTQGLTPFVRTGNA HHHHHHCCCCCEEECCCCCEEEECCCCCCEEECCEEEECCHHHCCCCCCCCCHHHCCCCC PALGLGALVLLVAFVRRRRASAD CCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLARLRFAMPLAALLGVMHTLSFAPNHWWWLQILSLTGLAALVQRAARLREAAWVGYAF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGWFLSGVWWLYISMHVYGDMPAWMGALAVLLFAGYLALHPALAVWAWQWLTRRGRWSG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TASALIFGAAWAVTEWLRGTVWTGFPWINGGYAHTDGPLAGYAPLVGVYGIVLIAAVLAG CHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LLCVAAERRLHWLAGIAGALVLVAGWPLHGIAWTQPVGKPISVRLLQGNVPQDVKFQQTG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCHHHHH IERSLELYTKMVTEKPAQLVVTPETAFPIMIQEMPQEIALALRTYVDTTGSSVLFGAASE HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC DSRVDYTNSVFGIGPQFQGVYRYNKHHLVPFGEFIPFGFHWFVNMMNMPLGDFRRGLPVQ CCCCCCCCCEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCC PPMAVADQRVAPNICYEDLFGEEIAASLRHADQPATMLANVTNLAWFGDTIALDQHLQIS CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHCCHHHHH RMRALETGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQTDVQGTQGLTPFVRTGNA HHHHHHCCCCCEEECCCCCEEEECCCCCCEEECCEEEECCHHHCCCCCCCCCHHHCCCCC PALGLGALVLLVAFVRRRRASAD CCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]