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The map label for this gene is glyQ [H]

Identifier: 187927505

GI number: 187927505

Start: 427523

End: 428509

Strand: Reverse

Name: glyQ [H]

Synonym: Rpic_0402

Alternate gene names: 187927505

Gene position: 428509-427523 (Counterclockwise)

Preceding gene: 187927506

Following gene: 187927504

Centisome position: 10.87

GC content: 65.25

Gene sequence:

>987_bases
ATGCTTACCTTCCAGCAACTCATTCTCAAGCTGCAGTCGTACTGGGACGCCCAGGGCTGCGCCCTGCTGCAACCGATCGA
CCTCGAAGTCGGCGCGGGCACGTCGCACGTGCACACCTTCCTGCGCGCGATCGGCCCGGAGCCGTGGCGTGCCGCCTACG
TGCAACCGTCGCGCCGCCCCAAGGACGGCCGCTACGGCGAGAATCCGAACCGCCTGCAGCACTACTACCAATATCAGGTG
GTGTTGAAGCCCGCGCCGGAAAACATCCTCGACCTGTACCTCGGTTCGCTGGAAGCGCTGGGCCTGGACCTCAAGCAGAA
CGATGTGCGCTTCGTCGAAGACGACTGGGAAAACCCCACGCTCGGCGCCTGGGGCCTCGGCTGGGAGGTGTGGCTCAACG
GCATGGAAGTCACGCAGTTCACGTACTTCCAGCAAGTTGGCGGCCTGGACTGCAAGCCCGTGACCGGTGAGATCACCTAC
GGCATCGAGCGCCTGGCGATGTACCTGCAGCAGGTCGAGAACATCTACGACCTGGTCTGGACGGAGTGGGAAGAGCCGGG
CCCGAACGGCCCCGTGAAGCGCCGCTTGACCTACGGCGACGTCTATCACCAGAACGAGGTCGAGCAATCGACCTACAACT
TCGAACAGGCCGACACGACGGTGCTGTTCCGCCGCTTTGCGGAGCACGAAGCCGAAGCCAAGCGCCTGATGGGCGTACGC
GCAGAAGGCGATGCCGCTGCCGAGGGCGACGCACCTGTCGTGCAACTGGCCCTGCCCGCCTACGAGCAAGTGCTCAAGGC
CGGCCACACCTTCAACCTGCTGGACGCACGCGGCGCCATTTCGGTGACGGAGCGCGCGGCCTACATCGGCCGCATCCGCA
ATTTGTCGCGCCTGGTCGCGCAGGCTTACTACGATTCGCGCGAGCGCCTGGGCTTCCCGATGTGCGGCACGGCCGCTGCC
GCTGTCAAGACCACGGAGGCCGCATGA

Upstream 100 bases:

>100_bases
GGCGGGCAGGGAGCCAGGCGCTTCCCGTGCCCGCCGCTGCATTCCACCGTCGCGCGGCGCAACGCACGTTCCGTGCCGCC
GCGGACCAACGGGTACCACC

Downstream 100 bases:

>100_bases
CGGCCAACCGAGCACGGCGTGGCCTGGCGCTGCTGACGGCAGCGTCCATCGCCGCGCTGACGCTACCGGCGAGCGTTGCC
CAAGCGGCGCGGCATCGCAC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVTGEITY
GIERLAMYLQQVENIYDLVWTEWEEPGPNGPVKRRLTYGDVYHQNEVEQSTYNFEQADTTVLFRRFAEHEAEAKRLMGVR
AEGDAAAEGDAPVVQLALPAYEQVLKAGHTFNLLDARGAISVTERAAYIGRIRNLSRLVAQAYYDSRERLGFPMCGTAAA
AVKTTEAA

Sequences:

>Translated_328_residues
MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVTGEITY
GIERLAMYLQQVENIYDLVWTEWEEPGPNGPVKRRLTYGDVYHQNEVEQSTYNFEQADTTVLFRRFAEHEAEAKRLMGVR
AEGDAAAEGDAPVVQLALPAYEQVLKAGHTFNLLDARGAISVTERAAYIGRIRNLSRLVAQAYYDSRERLGFPMCGTAAA
AVKTTEAA
>Mature_328_residues
MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQV
VLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVTGEITY
GIERLAMYLQQVENIYDLVWTEWEEPGPNGPVKRRLTYGDVYHQNEVEQSTYNFEQADTTVLFRRFAEHEAEAKRLMGVR
AEGDAAAEGDAPVVQLALPAYEQVLKAGHTFNLLDARGAISVTERAAYIGRIRNLSRLVAQAYYDSRERLGFPMCGTAAA
AVKTTEAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=313, Percent_Identity=67.7316293929712, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 37025; Mature: 37025

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRP
CCCHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVTGEITYGIERLAMYLQQVENIYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEPGPNGPVKRRLTYGDVYHQNEVEQSTYNFEQADTTVLFRRFAEHEAEAKRLMGVR
HCCCCCCCCCCHHEEEEECHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AEGDAAAEGDAPVVQLALPAYEQVLKAGHTFNLLDARGAISVTERAAYIGRIRNLSRLVA
CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QAYYDSRERLGFPMCGTAAAAVKTTEAA
HHHHHHHHHCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MLTFQQLILKLQSYWDAQGCALLQPIDLEVGAGTSHVHTFLRAIGPEPWRAAYVQPSRRP
CCCHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCC
KDGRYGENPNRLQHYYQYQVVLKPAPENILDLYLGSLEALGLDLKQNDVRFVEDDWENPT
CCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCC
LGAWGLGWEVWLNGMEVTQFTYFQQVGGLDCKPVTGEITYGIERLAMYLQQVENIYDLVW
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TEWEEPGPNGPVKRRLTYGDVYHQNEVEQSTYNFEQADTTVLFRRFAEHEAEAKRLMGVR
HCCCCCCCCCCHHEEEEECHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AEGDAAAEGDAPVVQLALPAYEQVLKAGHTFNLLDARGAISVTERAAYIGRIRNLSRLVA
CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QAYYDSRERLGFPMCGTAAAAVKTTEAA
HHHHHHHHHCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]