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The map label for this gene is dadA [H]

Identifier: 187927486

GI number: 187927486

Start: 405918

End: 407201

Strand: Reverse

Name: dadA [H]

Synonym: Rpic_0383

Alternate gene names: 187927486

Gene position: 407201-405918 (Counterclockwise)

Preceding gene: 187927487

Following gene: 187927485

Centisome position: 10.33

GC content: 68.22

Gene sequence:

>1284_bases
ATGGCGTGTGCCGAGGTAGGCGCTGCAGGCGACCGCCAGCAGATCACCGTGGTGGGCGCCGGCATTGTCGGCACGGCGTG
CGCACTGCAATTGCAACGGGATGGCCACCAGGTCACGCTGCTCGATCAGGCCGGCATTGGCGAAGGCTGCTCGTTCGGCA
ACGCCGGCTGCCTGAGCGTGGCGTCGGTCGTGCCGATGGCGCTACCGGGCATGCTGAAGCAGGTGCCCAAATGGCTGGCC
GATCCAATGGGCCCGCTGACGGTACGTTGGCACTATCTGCCGCGCGCGCTGCCCTGGCTGCTGCAATGGGTGTTTGCGGG
CAACGAGACGCAGGCCCGTGCGACGGCGCAGCCGCTGGCGAGTCTCTTCAGCGCGACCTTTCCCGGTTATCGAAACCTGC
TCGACGCCGCGCAATATGACGGCCTGATCCGTCAGACGGGCCATCTGTATGTGTGGCGCACGCTGGCGCGCTCGTCGGGC
GATGTGCTGGCGCAGTCCATTCGCGATGCCACCGGCGTGCGCTCGCAAGCCCTGAGCGCCGGCGAAGCGCGCGAACTCGA
GCCCGCACTGGCCGCCGACATCCAATCCGGCCTGCTGCTGCCCGACAACGGCTTCACGGTCAACCCGGAACGTCTGGTCA
AGACGCTGGCGGCCAACTTTGCCGCAGCGGGCGGCACCTTCCTGCGCCGCAAGGTGCTGGACGTGGAATTCGGCCGAAGC
GACTACGGCGGCCCGACGCGGCTGCACACCGATTGCGGCACGCTGCCCGTGTCGAAGCTGGTGCTGTGCGCGGGTGCGTG
GTCGATGCGGCTGGGCGCAAAGCTCACCAGCATCCGCATTCCGCTCAACACGGAACGCGGCTATCACGCCACGCTGCGCG
CGCCCAGCGTGCAGCCTTCACGGCCAATCATGGATTGCGAGCGCAAGTTCATCGCGACGCCCATGGAAGGCGGCCTGCGC
ATTGCCGGCACCGTGGAGATCGGCGGGTTGGACGCTGCGCCCGACTACCGCCGCGCCCGCATCCTCATGCGACAGGGCCA
GCAGCTCTTCCCCGGCCTCGGCTTTACGGACGACAGCCAATGGATGGGCCATCGGCCCTCTCTACCCGACAGCCTGCCCG
TGATCGACCGCTCGGAGCGCTACCGCAACGTGTTCTTCGCGTTCGGGCACGGCCACCTGGGCATGACAGGCGCGCCAGGC
ACCGCCCGACTCATCGCCGATCTGGTCAGCGAGCGCACGCCTTTCATCGACGGCCGCCCCTACGGCCTGCAACGGTTCCG
CTAG

Upstream 100 bases:

>100_bases
TGGCCACCTGCGCGGCGCCGCGCTCACGCTGCTGGAATGCCTGCCGCCGCTCAAGCATGGGCTCGCCCGGCAGATGATGT
TCGGGCAGCGAGGCTAACGG

Downstream 100 bases:

>100_bases
CGCCAGCCACGGCAAGAACCCGGCCGCCGACCGCACTGCCGCATAGTTTGTGCACAACATTTAGGCAATCCGGCGGTTTG
GCGGTAAAATCCCGTCCTCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MACAEVGAAGDRQQITVVGAGIVGTACALQLQRDGHQVTLLDQAGIGEGCSFGNAGCLSVASVVPMALPGMLKQVPKWLA
DPMGPLTVRWHYLPRALPWLLQWVFAGNETQARATAQPLASLFSATFPGYRNLLDAAQYDGLIRQTGHLYVWRTLARSSG
DVLAQSIRDATGVRSQALSAGEARELEPALAADIQSGLLLPDNGFTVNPERLVKTLAANFAAAGGTFLRRKVLDVEFGRS
DYGGPTRLHTDCGTLPVSKLVLCAGAWSMRLGAKLTSIRIPLNTERGYHATLRAPSVQPSRPIMDCERKFIATPMEGGLR
IAGTVEIGGLDAAPDYRRARILMRQGQQLFPGLGFTDDSQWMGHRPSLPDSLPVIDRSERYRNVFFAFGHGHLGMTGAPG
TARLIADLVSERTPFIDGRPYGLQRFR

Sequences:

>Translated_427_residues
MACAEVGAAGDRQQITVVGAGIVGTACALQLQRDGHQVTLLDQAGIGEGCSFGNAGCLSVASVVPMALPGMLKQVPKWLA
DPMGPLTVRWHYLPRALPWLLQWVFAGNETQARATAQPLASLFSATFPGYRNLLDAAQYDGLIRQTGHLYVWRTLARSSG
DVLAQSIRDATGVRSQALSAGEARELEPALAADIQSGLLLPDNGFTVNPERLVKTLAANFAAAGGTFLRRKVLDVEFGRS
DYGGPTRLHTDCGTLPVSKLVLCAGAWSMRLGAKLTSIRIPLNTERGYHATLRAPSVQPSRPIMDCERKFIATPMEGGLR
IAGTVEIGGLDAAPDYRRARILMRQGQQLFPGLGFTDDSQWMGHRPSLPDSLPVIDRSERYRNVFFAFGHGHLGMTGAPG
TARLIADLVSERTPFIDGRPYGLQRFR
>Mature_426_residues
ACAEVGAAGDRQQITVVGAGIVGTACALQLQRDGHQVTLLDQAGIGEGCSFGNAGCLSVASVVPMALPGMLKQVPKWLAD
PMGPLTVRWHYLPRALPWLLQWVFAGNETQARATAQPLASLFSATFPGYRNLLDAAQYDGLIRQTGHLYVWRTLARSSGD
VLAQSIRDATGVRSQALSAGEARELEPALAADIQSGLLLPDNGFTVNPERLVKTLAANFAAAGGTFLRRKVLDVEFGRSD
YGGPTRLHTDCGTLPVSKLVLCAGAWSMRLGAKLTSIRIPLNTERGYHATLRAPSVQPSRPIMDCERKFIATPMEGGLRI
AGTVEIGGLDAAPDYRRARILMRQGQQLFPGLGFTDDSQWMGHRPSLPDSLPVIDRSERYRNVFFAFGHGHLGMTGAPGT
ARLIADLVSERTPFIDGRPYGLQRFR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=435, Percent_Identity=29.1954022988506, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46072; Mature: 45941

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACAEVGAAGDRQQITVVGAGIVGTACALQLQRDGHQVTLLDQAGIGEGCSFGNAGCLSV
CCCCCCCCCCCCCEEEEEECCHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHH
ASVVPMALPGMLKQVPKWLADPMGPLTVRWHYLPRALPWLLQWVFAGNETQARATAQPLA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLFSATFPGYRNLLDAAQYDGLIRQTGHLYVWRTLARSSGDVLAQSIRDATGVRSQALSA
HHHHHCCCHHHHHHHHHHHCCHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCC
GEARELEPALAADIQSGLLLPDNGFTVNPERLVKTLAANFAAAGGTFLRRKVLDVEFGRS
CCCHHCCHHHHHHHHCCEEECCCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCC
DYGGPTRLHTDCGTLPVSKLVLCAGAWSMRLGAKLTSIRIPLNTERGYHATLRAPSVQPS
CCCCCCEEECCCCCCHHHHHHHHHCCHHHHHCCEEEEEEEEECCCCCCEEEEECCCCCCC
RPIMDCERKFIATPMEGGLRIAGTVEIGGLDAAPDYRRARILMRQGQQLFPGLGFTDDSQ
CCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCC
WMGHRPSLPDSLPVIDRSERYRNVFFAFGHGHLGMTGAPGTARLIADLVSERTPFIDGRP
CCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YGLQRFR
CCCCCCC
>Mature Secondary Structure 
ACAEVGAAGDRQQITVVGAGIVGTACALQLQRDGHQVTLLDQAGIGEGCSFGNAGCLSV
CCCCCCCCCCCCEEEEEECCHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHH
ASVVPMALPGMLKQVPKWLADPMGPLTVRWHYLPRALPWLLQWVFAGNETQARATAQPLA
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
SLFSATFPGYRNLLDAAQYDGLIRQTGHLYVWRTLARSSGDVLAQSIRDATGVRSQALSA
HHHHHCCCHHHHHHHHHHHCCHHHHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCC
GEARELEPALAADIQSGLLLPDNGFTVNPERLVKTLAANFAAAGGTFLRRKVLDVEFGRS
CCCHHCCHHHHHHHHCCEEECCCCCEECHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCC
DYGGPTRLHTDCGTLPVSKLVLCAGAWSMRLGAKLTSIRIPLNTERGYHATLRAPSVQPS
CCCCCCEEECCCCCCHHHHHHHHHCCHHHHHCCEEEEEEEEECCCCCCEEEEECCCCCCC
RPIMDCERKFIATPMEGGLRIAGTVEIGGLDAAPDYRRARILMRQGQQLFPGLGFTDDSQ
CCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCC
WMGHRPSLPDSLPVIDRSERYRNVFFAFGHGHLGMTGAPGTARLIADLVSERTPFIDGRP
CCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
YGLQRFR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA