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The map label for this gene is ypdP [H]

Identifier: 187927478

GI number: 187927478

Start: 398355

End: 399071

Strand: Reverse

Name: ypdP [H]

Synonym: Rpic_0375

Alternate gene names: 187927478

Gene position: 399071-398355 (Counterclockwise)

Preceding gene: 187927479

Following gene: 187927474

Centisome position: 10.12

GC content: 61.65

Gene sequence:

>717_bases
ATGTCTGCCGCCCCGCACCACCCGAACCGCACGTTCCGATACTACGACTTCATCATGGCGGCCTTCGTCACAGTGCTGCT
GTGCTCGAACCTGATCGGCGCGTCCAAGGCGGCGCAGGTCACGTTGCCGGTGCTCGGATCGGTCACCTTCGGCGCTGGCG
TGCTGTTCTTTCCAATTTCCTACATCTTCGGCGACATCCTCACCGAGGTGTACGGTTACGGGCGTGATCGGCGCGTGGTG
TGGGCGGGCTTTGCCGCACTGATCTTTGCGTCGTTCATGTCGCTGGTCGTGCTGGCGCTACCGGTGGCGCCCTTCATGGC
CGGTTATCAGAGGAGCCTGAACGACGTGTTCGGCAACACGCCGCGCATCGTCGCCGGGTCGCTCATTGCGTTCTGGTGTG
GCAGCTTCGCCAACAGCTACACGCTGGCGAAGATGAAGATCGCGACGGAAGGAAAATGGCTGTGGACGCGCATCGTCGGA
TCCACCGTGGTGGGCGAGGCGGTCGATTCGTCGCTGTTCTACGTGATCGCCTTCTACGGCATCTGGCCCCACGAACAGGT
GCTGCGTGTCGCCATTGCGCAATACATCCTCAAGACTGGCTGGGAAATCGTCGCAACGCCGCTCACCTACCGCGTCGTCG
CCTTCCTCAAGCGCGCCGAGAACGAGGATTACTACGACCGCGACACCAACTTCACGCCGTTCCGGCTGAAGGTTTAA

Upstream 100 bases:

>100_bases
CCACGGCTTCGGCATACCAGCACTTCGGGCTGGGCGCTCCCAAGAGCGGCCCGGTGCGGGACCTCTGGGACGACAACCAA
TAACCCCCGCGCGCCCCGAC

Downstream 100 bases:

>100_bases
GGAACACGGCGGTCCACTTCGTCGAGCACCAGCAAATCCAGGTGCGCGACATCCCCCCATTGCAACACGGTCAGTTGATG
ACCATCGGATGAAAGCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSAAPHHPNRTFRYYDFIMAAFVTVLLCSNLIGASKAAQVTLPVLGSVTFGAGVLFFPISYIFGDILTEVYGYGRDRRVV
WAGFAALIFASFMSLVVLALPVAPFMAGYQRSLNDVFGNTPRIVAGSLIAFWCGSFANSYTLAKMKIATEGKWLWTRIVG
STVVGEAVDSSLFYVIAFYGIWPHEQVLRVAIAQYILKTGWEIVATPLTYRVVAFLKRAENEDYYDRDTNFTPFRLKV

Sequences:

>Translated_238_residues
MSAAPHHPNRTFRYYDFIMAAFVTVLLCSNLIGASKAAQVTLPVLGSVTFGAGVLFFPISYIFGDILTEVYGYGRDRRVV
WAGFAALIFASFMSLVVLALPVAPFMAGYQRSLNDVFGNTPRIVAGSLIAFWCGSFANSYTLAKMKIATEGKWLWTRIVG
STVVGEAVDSSLFYVIAFYGIWPHEQVLRVAIAQYILKTGWEIVATPLTYRVVAFLKRAENEDYYDRDTNFTPFRLKV
>Mature_237_residues
SAAPHHPNRTFRYYDFIMAAFVTVLLCSNLIGASKAAQVTLPVLGSVTFGAGVLFFPISYIFGDILTEVYGYGRDRRVVW
AGFAALIFASFMSLVVLALPVAPFMAGYQRSLNDVFGNTPRIVAGSLIAFWCGSFANSYTLAKMKIATEGKWLWTRIVGS
TVVGEAVDSSLFYVIAFYGIWPHEQVLRVAIAQYILKTGWEIVATPLTYRVVAFLKRAENEDYYDRDTNFTPFRLKV

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 26538; Mature: 26407

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPHHPNRTFRYYDFIMAAFVTVLLCSNLIGASKAAQVTLPVLGSVTFGAGVLFFPIS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHH
YIFGDILTEVYGYGRDRRVVWAGFAALIFASFMSLVVLALPVAPFMAGYQRSLNDVFGNT
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRIVAGSLIAFWCGSFANSYTLAKMKIATEGKWLWTRIVGSTVVGEAVDSSLFYVIAFYG
CHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IWPHEQVLRVAIAQYILKTGWEIVATPLTYRVVAFLKRAENEDYYDRDTNFTPFRLKV
CCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SAAPHHPNRTFRYYDFIMAAFVTVLLCSNLIGASKAAQVTLPVLGSVTFGAGVLFFPIS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHH
YIFGDILTEVYGYGRDRRVVWAGFAALIFASFMSLVVLALPVAPFMAGYQRSLNDVFGNT
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRIVAGSLIAFWCGSFANSYTLAKMKIATEGKWLWTRIVGSTVVGEAVDSSLFYVIAFYG
CHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IWPHEQVLRVAIAQYILKTGWEIVATPLTYRVVAFLKRAENEDYYDRDTNFTPFRLKV
CCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]