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The map label for this gene is yciA [C]

Identifier: 187927456

GI number: 187927456

Start: 377390

End: 377827

Strand: Reverse

Name: yciA [C]

Synonym: Rpic_0353

Alternate gene names: 187927456

Gene position: 377827-377390 (Counterclockwise)

Preceding gene: 187927464

Following gene: 187927428

Centisome position: 9.58

GC content: 64.38

Gene sequence:

>438_bases
ATGCTGCCCTGCATCATCATGTCCGATACCCATGCCGCCACCGAAACCGTCACGCTGCCCGCCGACAAGCAGCCCGCCGT
GCGCGTGATGCCCATGCCGTCCGACGCCAACGTCCACGGTGATGTGTTTGGCGGCTGGATCATGTCGCAGGTGGACATTG
CCGGGTCGATCCCAGCCGTGGTACGCGCCAACGGCCGTGTCGCCACGATCGCGGTCAACTCGTTTGTCTTCAAGCAACCT
GTGTACGTGGGCGATCTGGTGAGCTTCTACGCTAACGTGGTCAAGACGGGGCGCACGTCGATCACCGTGGATGTGGAGGT
CTATGCGCAACGCATGCACGCCAGCGGTCGCCACGCCACCGTCAAGGTGACGGAAGCCACCCTCACCTACGTGGCGACCG
ACGAGACTCGCAAGCCGCGCGTGCTGCCGCCGCTCTGA

Upstream 100 bases:

>100_bases
GCGGCGCATGTGCGGTGCAATAAAATGGCGGATTGTGTATTCTCCCACCGATCACCTGCGCGCGCCCCAGGCGCGCTGGT
GGGCCCTCCCTCCCGCCTCA

Downstream 100 bases:

>100_bases
AGGGGCAACGGCCAAGAAAAAACCCGGCTTCGCGCCGGGTTTTCTTTTGCAGGTGAACGATTCGCTCAGTTGAACTTGGA
GAAATCCGGGCGGCGCTTTT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLPCIIMSDTHAATETVTLPADKQPAVRVMPMPSDANVHGDVFGGWIMSQVDIAGSIPAVVRANGRVATIAVNSFVFKQP
VYVGDLVSFYANVVKTGRTSITVDVEVYAQRMHASGRHATVKVTEATLTYVATDETRKPRVLPPL

Sequences:

>Translated_145_residues
MLPCIIMSDTHAATETVTLPADKQPAVRVMPMPSDANVHGDVFGGWIMSQVDIAGSIPAVVRANGRVATIAVNSFVFKQP
VYVGDLVSFYANVVKTGRTSITVDVEVYAQRMHASGRHATVKVTEATLTYVATDETRKPRVLPPL
>Mature_145_residues
MLPCIIMSDTHAATETVTLPADKQPAVRVMPMPSDANVHGDVFGGWIMSQVDIAGSIPAVVRANGRVATIAVNSFVFKQP
VYVGDLVSFYANVVKTGRTSITVDVEVYAQRMHASGRHATVKVTEATLTYVATDETRKPRVLPPL

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=117, Percent_Identity=45.2991452991453, Blast_Score=113, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 15609; Mature: 15609

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPCIIMSDTHAATETVTLPADKQPAVRVMPMPSDANVHGDVFGGWIMSQVDIAGSIPAV
CCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEECCCCCCEE
VRANGRVATIAVNSFVFKQPVYVGDLVSFYANVVKTGRTSITVDVEVYAQRMHASGRHAT
EECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEE
VKVTEATLTYVATDETRKPRVLPPL
EEEEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLPCIIMSDTHAATETVTLPADKQPAVRVMPMPSDANVHGDVFGGWIMSQVDIAGSIPAV
CCCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCEECCEEEEEEECCCCCCEE
VRANGRVATIAVNSFVFKQPVYVGDLVSFYANVVKTGRTSITVDVEVYAQRMHASGRHAT
EECCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEE
VKVTEATLTYVATDETRKPRVLPPL
EEEEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438; 8407819 [H]