Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is ilvA [H]
Identifier: 187927428
GI number: 187927428
Start: 341853
End: 343373
Strand: Reverse
Name: ilvA [H]
Synonym: Rpic_0325
Alternate gene names: 187927428
Gene position: 343373-341853 (Counterclockwise)
Preceding gene: 187927456
Following gene: 187927427
Centisome position: 8.71
GC content: 62.79
Gene sequence:
>1521_bases ATGGCCATCGATTACCTCAAGAAAATCCTGACTGCGAAGGTCTATGACGTCGCGGTGGAAACCGAGCTGAAGTTCGCGCC CAACCTGTCAGTGCGCACCGGCAACCGCGTCTACCTCAAGCGCGAGGATGACCAGCCGGTGTTCTCGTTCAAGCTGCGCG GCGCCTACAACAAGATGGCCTCGCTCACGCCGGCCGAGCGCAAGCGCGGGGTAATTACGGCATCGGCGGGCAACCACGCG CAGGGCGTGGCGTTCAGCGCGGCGCGCATGGAATGCAAGGCGGTAATCTGCATGCCAGTGACGACGCCGCAGTTGAAGAT TGACGGCGTGCGCTCGCGCGGCGGCGATTGGGTCGACGTTGTGCTGCACGGTGAAAGCTATTCCGACGCCTACAACCACG CCGCCAAGCTGCAGGAAAAACATGGCTACACCTTCGTTCACCCGTTCGACGATCCGGAAGTGATTGCCGGCCAGGGCACG ATCGCCATGGAAATCCTGCGCCAACATCCGCAGCCGATCCATGCGATCTTTTGCTCGATCGGTGGCGGCGGGCTGATCTC GGGCATTGCGGCCTACGTGAAGGCCGTGCGACCGGACGTCAAGGTCATCGGCGTGCAGAGCGTGGATTCCGACGCGATGG CGCGCTCGGTGGCCGCCGGCAAGCGCGTCGAACTGAAGGAGGTGGGCCTGTTTGCGGACGGCACGGCGGTCAAGCTGGTG GGCAAGGAGACTTTCCGCCTCACGCGCGAACTCGTCGACGAGATCATCACCGTGGATACGGATGCCATCTGCGCGGCGCT CAAGGACGTGTTCCAGGACACGCGCAGCCTGCTGGAGCCGTCGGGCGCGCTGGCGCTGGCCGGCCTCAAGCAGTATGCCG AGACGCACAAGCTGAAGAACGAATCGCTCGTGGCCGTGGCGAGCGGGGCGAACATGAACTTCGACCGCCTGCGCTTCGTG GCCGAGCGCGCCGAAGTGGGCGAGGCCCGCGAAGCCGTGTTTGCCGTGACGATTCCGGAAGAGCGCGGCAGCTTCAAGCG CTTCTGCGAACTGGTCGGCTGGTCGCGCAACGTGACGGAGTTCAACTACCGCATTGCCAGCAAGGACGCCGCGCATATCT TCGTGGGCGTGCAAATTGCGTCGCGCGCAGAGGGCGACAAGATTGCCGAGAACTTCCGCAAGCACGGCTTCCCGACACTG GACCTGTCGAACGACGAACTGGCCAAGCAGCACATCCGCTACATGGTGGGTGGGCGTTCGCCGCTGGCAGAGAACGAGCA TCTCTACCGCTTCGAGTTTCCTGAGCGGCCAGGCGCGCTGATGAAGTTCCTCTCGAGCATGAGCCCGAACTGGAACATCA GCCTGTTCCACTACCGTAACCAAGGCGCGGATTCGAGCAACATCCTCGTCGGCATCCAGGTACCGAAGAACGAGAAGCGC GAGTTCAAGGCGTTCCTCGCCACGCTGGGCTATACCTATTGGGACGAAAGCGAGAACCCCGTCTACAGCCTGTTTTTGTG A
Upstream 100 bases:
>100_bases GCCGGGGCAGTGTACCGACCGGCACGCCAGTCCGGCAAGGCGGGCCAGGCGCCGCGTGATAGGCTTACGGGCTCTGTTCA CGTCCAACCCGGTCCGCACC
Downstream 100 bases:
>100_bases TGAGCAACCAACCCGAACATTCGCCGCTGGGCAAGACGTCCGCCTACAAGACGGAGTACGACCCGCACCTGCTGTTTCCG ATTCCGCGCCAGGGCAAGCG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAIDYLKKILTAKVYDVAVETELKFAPNLSVRTGNRVYLKREDDQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHA QGVAFSAARMECKAVICMPVTTPQLKIDGVRSRGGDWVDVVLHGESYSDAYNHAAKLQEKHGYTFVHPFDDPEVIAGQGT IAMEILRQHPQPIHAIFCSIGGGGLISGIAAYVKAVRPDVKVIGVQSVDSDAMARSVAAGKRVELKEVGLFADGTAVKLV GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSLLEPSGALALAGLKQYAETHKLKNESLVAVASGANMNFDRLRFV AERAEVGEAREAVFAVTIPEERGSFKRFCELVGWSRNVTEFNYRIASKDAAHIFVGVQIASRAEGDKIAENFRKHGFPTL DLSNDELAKQHIRYMVGGRSPLAENEHLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR EFKAFLATLGYTYWDESENPVYSLFL
Sequences:
>Translated_506_residues MAIDYLKKILTAKVYDVAVETELKFAPNLSVRTGNRVYLKREDDQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHA QGVAFSAARMECKAVICMPVTTPQLKIDGVRSRGGDWVDVVLHGESYSDAYNHAAKLQEKHGYTFVHPFDDPEVIAGQGT IAMEILRQHPQPIHAIFCSIGGGGLISGIAAYVKAVRPDVKVIGVQSVDSDAMARSVAAGKRVELKEVGLFADGTAVKLV GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSLLEPSGALALAGLKQYAETHKLKNESLVAVASGANMNFDRLRFV AERAEVGEAREAVFAVTIPEERGSFKRFCELVGWSRNVTEFNYRIASKDAAHIFVGVQIASRAEGDKIAENFRKHGFPTL DLSNDELAKQHIRYMVGGRSPLAENEHLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR EFKAFLATLGYTYWDESENPVYSLFL >Mature_505_residues AIDYLKKILTAKVYDVAVETELKFAPNLSVRTGNRVYLKREDDQPVFSFKLRGAYNKMASLTPAERKRGVITASAGNHAQ GVAFSAARMECKAVICMPVTTPQLKIDGVRSRGGDWVDVVLHGESYSDAYNHAAKLQEKHGYTFVHPFDDPEVIAGQGTI AMEILRQHPQPIHAIFCSIGGGGLISGIAAYVKAVRPDVKVIGVQSVDSDAMARSVAAGKRVELKEVGLFADGTAVKLVG KETFRLTRELVDEIITVDTDAICAALKDVFQDTRSLLEPSGALALAGLKQYAETHKLKNESLVAVASGANMNFDRLRFVA ERAEVGEAREAVFAVTIPEERGSFKRFCELVGWSRNVTEFNYRIASKDAAHIFVGVQIASRAEGDKIAENFRKHGFPTLD LSNDELAKQHIRYMVGGRSPLAENEHLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKRE FKAFLATLGYTYWDESENPVYSLFL
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=291, Percent_Identity=35.7388316151203, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI33469958, Length=321, Percent_Identity=30.8411214953271, Blast_Score=89, Evalue=1e-17, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=51.3888888888889, Blast_Score=491, Evalue=1e-140, Organism=Escherichia coli, GI1789505, Length=321, Percent_Identity=37.0716510903427, Blast_Score=170, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71991565, Length=325, Percent_Identity=31.3846153846154, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17508781, Length=285, Percent_Identity=30.1754385964912, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17537387, Length=350, Percent_Identity=30.2857142857143, Blast_Score=124, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320930, Length=519, Percent_Identity=48.5549132947977, Blast_Score=463, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322631, Length=293, Percent_Identity=33.7883959044369, Blast_Score=139, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6319788, Length=271, Percent_Identity=26.5682656826568, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355833, Length=319, Percent_Identity=30.4075235109718, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=28.6274509803922, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55974; Mature: 55843
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDYLKKILTAKVYDVAVETELKFAPNLSVRTGNRVYLKREDDQPVFSFKLRGAYNKMA CCHHHHHHHHHHHHHEEEEEEEEEECCCCEEECCCEEEEEECCCCCEEEEEECCHHHHHH SLTPAERKRGVITASAGNHAQGVAFSAARMECKAVICMPVTTPQLKIDGVRSRGGDWVDV CCCHHHHHCCEEEECCCCCCCCEEEHHHHEEEEEEEEEECCCCCEEECCCCCCCCCEEEE VLHGESYSDAYNHAAKLQEKHGYTFVHPFDDPEVIAGQGTIAMEILRQHPQPIHAIFCSI EEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCEEEEEEEC GGGGLISGIAAYVKAVRPDVKVIGVQSVDSDAMARSVAAGKRVELKEVGLFADGTAVKLV CCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEHHHCCEEECCCEEEEE GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSLLEPSGALALAGLKQYAETHKLKN CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC ESLVAVASGANMNFDRLRFVAERAEVGEAREAVFAVTIPEERGSFKRFCELVGWSRNVTE CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCCCEE FNYRIASKDAAHIFVGVQIASRAEGDKIAENFRKHGFPTLDLSNDELAKQHIRYMVGGRS EEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCC PLAENEHLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH EFKAFLATLGYTYWDESENPVYSLFL HHHHHHHHHCCCEECCCCCCEEEEEC >Mature Secondary Structure AIDYLKKILTAKVYDVAVETELKFAPNLSVRTGNRVYLKREDDQPVFSFKLRGAYNKMA CHHHHHHHHHHHHHEEEEEEEEEECCCCEEECCCEEEEEECCCCCEEEEEECCHHHHHH SLTPAERKRGVITASAGNHAQGVAFSAARMECKAVICMPVTTPQLKIDGVRSRGGDWVDV CCCHHHHHCCEEEECCCCCCCCEEEHHHHEEEEEEEEEECCCCCEEECCCCCCCCCEEEE VLHGESYSDAYNHAAKLQEKHGYTFVHPFDDPEVIAGQGTIAMEILRQHPQPIHAIFCSI EEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCHHHHHHHHHCCCCEEEEEEEC GGGGLISGIAAYVKAVRPDVKVIGVQSVDSDAMARSVAAGKRVELKEVGLFADGTAVKLV CCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCEEHHHCCEEECCCEEEEE GKETFRLTRELVDEIITVDTDAICAALKDVFQDTRSLLEPSGALALAGLKQYAETHKLKN CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC ESLVAVASGANMNFDRLRFVAERAEVGEAREAVFAVTIPEERGSFKRFCELVGWSRNVTE CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCCCEE FNYRIASKDAAHIFVGVQIASRAEGDKIAENFRKHGFPTLDLSNDELAKQHIRYMVGGRS EEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCC PLAENEHLYRFEFPERPGALMKFLSSMSPNWNISLFHYRNQGADSSNILVGIQVPKNEKR CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHH EFKAFLATLGYTYWDESENPVYSLFL HHHHHHHHHCCCEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA