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The map label for this gene is 187927450

Identifier: 187927450

GI number: 187927450

Start: 369079

End: 369720

Strand: Direct

Name: 187927450

Synonym: Rpic_0347

Alternate gene names: NA

Gene position: 369079-369720 (Clockwise)

Preceding gene: 187927449

Following gene: 187927451

Centisome position: 9.36

GC content: 61.53

Gene sequence:

>642_bases
ATGCGTCACCCGACCGCTCGTCTCGAATCGAATCACGCAGCAGCCACGCCGATGCGAAAGGGCGAGTTGACGCGTGCAGC
GATTCTCGATGCCGCGCTGGAACTGGCCTCGCGCGACGGACTGGAAGGATTGACGATCGGTGTGCTCGCGGAGCGCATGC
AGATGAGCAAGAGCGGGGTGTTCGCGCACTTCGGCTCGCGTGAGGATCTGCAGGTGGAAGTGGTTCGCGAGTATCACAAA
CGGTTCGAGCAGGAAGTTTTCTACCCGAGCTTGACGGAACCGCGCGGTCTGCCGCGCCTGTGGAGCATGGTGCGACGCTG
GATGGAGCGCCGCATTCAGGAAGTGACCACGGGCTGCATCTACATCAGCGGCGCGGTGGAGTACGACGATCGTGCCGAAA
GCCCGGTGCGCGACGAACTCGTCAAGAGCGTGACGATCTGGCGTGCAGCATTGGCCCGCGCGATCGCACAGGCAAAGGAA
GAAGGCCACCTGCGTGCAGAAGCGGACCCGCAATTGATGCTCTTCGAGATGTACAGCCTGGAACTGGGTCTGCATCACGA
TGCGCGTTTCCTGCGGTTGCCGAACAGCGCCGAGCTGGCCATGGTGGCGCTTAACAAACTCATTCAGTCTTACCGAACCT
GA

Upstream 100 bases:

>100_bases
GCAGGCTGGTTTACAGTCCTGCCCGGCACGCGAAAGGCGCCCTGCAAGAAGCCAATTTTCTCGCGTGTCACGCCCCAGAA
AAGAACGGAGAGAAATCATC

Downstream 100 bases:

>100_bases
CGCGGCCGTCGCACACCTAGCGGGTCGCGCAGCAACAACCAAGGAGCCCAAGATGGGTCAATACACCGCACCGTTGCGCG
ACATGCAGTTTGTCCTCCAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRHPTARLESNHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHK
RFEQEVFYPSLTEPRGLPRLWSMVRRWMERRIQEVTTGCIYISGAVEYDDRAESPVRDELVKSVTIWRAALARAIAQAKE
EGHLRAEADPQLMLFEMYSLELGLHHDARFLRLPNSAELAMVALNKLIQSYRT

Sequences:

>Translated_213_residues
MRHPTARLESNHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHK
RFEQEVFYPSLTEPRGLPRLWSMVRRWMERRIQEVTTGCIYISGAVEYDDRAESPVRDELVKSVTIWRAALARAIAQAKE
EGHLRAEADPQLMLFEMYSLELGLHHDARFLRLPNSAELAMVALNKLIQSYRT
>Mature_213_residues
MRHPTARLESNHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGVFAHFGSREDLQVEVVREYHK
RFEQEVFYPSLTEPRGLPRLWSMVRRWMERRIQEVTTGCIYISGAVEYDDRAESPVRDELVKSVTIWRAALARAIAQAKE
EGHLRAEADPQLMLFEMYSLELGLHHDARFLRLPNSAELAMVALNKLIQSYRT

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24291; Mature: 24291

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPTARLESNHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGV
CCCCCCHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FAHFGSREDLQVEVVREYHKRFEQEVFYPSLTEPRGLPRLWSMVRRWMERRIQEVTTGCI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE
YISGAVEYDDRAESPVRDELVKSVTIWRAALARAIAQAKEEGHLRAEADPQLMLFEMYSL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH
ELGLHHDARFLRLPNSAELAMVALNKLIQSYRT
HHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRHPTARLESNHAAATPMRKGELTRAAILDAALELASRDGLEGLTIGVLAERMQMSKSGV
CCCCCCHHCCCCCCCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FAHFGSREDLQVEVVREYHKRFEQEVFYPSLTEPRGLPRLWSMVRRWMERRIQEVTTGCI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE
YISGAVEYDDRAESPVRDELVKSVTIWRAALARAIAQAKEEGHLRAEADPQLMLFEMYSL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH
ELGLHHDARFLRLPNSAELAMVALNKLIQSYRT
HHCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA