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The map label for this gene is ydiF [H]

Identifier: 187927449

GI number: 187927449

Start: 367061

End: 368725

Strand: Direct

Name: ydiF [H]

Synonym: Rpic_0346

Alternate gene names: 187927449

Gene position: 367061-368725 (Clockwise)

Preceding gene: 187927448

Following gene: 187927450

Centisome position: 9.31

GC content: 66.67

Gene sequence:

>1665_bases
ATGCAAGTCATCACAGCGGATGAGGCCGCGCGATTGGTGCAGCCCGGGTGGACGGTGGCATGCGCGGGGTTTGTCGGCGC
GGGCCATGCAGAGGCCGTCACGCACGCGCTGGAACGCCGCTTTCTGACCACAGGCGAACCGCGCGATCTCACGCTGGTCT
ACTCCGCCGGACAGGGCGATCGCGCTACGCGCGGCGTCAACCATTTCGGCAATCCAGAGATGACGCGCTGCGTGGTGGGT
GGGCATTGGCGCTCGGCCACGCGGCTCGCAGACATGGCGCTTGCCGAGCAATGCGATGCGTTCAACCTGCCGCAGGGCGT
GCTCACGCATCTGTACCGCGCCATCGCGGGCGGCAAGCCTGGCGTGCTGACCAAGATGGGCCTGCATACCTTCGTCGACC
CACGCACGGAGCTTGACCCGCGCTACCACGGTGGGGCGATCAATCACCGCGCAAAGGCGGCGCGAGCGGCAGGTAAGGCG
TCCTGGGTCGAATACGAGCGCTTTCGGGGCGATGACTATCTCTTCTACCCCAGCTTCCCGCTGCACTGCGTCTTTCTGCG
CGGCACTGCCGCCGACCCGCGCGGCAACATCAGCACGCACGAAGAAGCCTTTCACCACGAGTTGCTGGCCATGGCGCAGG
CCGCGCGCAACTCGGGCGGCATCGTCATCGCGCAGGTGCGTCGGCTCGTCGATCGGCATGACAACCTGCAGGCGATCCAC
GTGCCGGGCATCCTCGTCGATTACGTGGTCGTTGCCGAGGATGAAGCCGAACACCAGATGACCTTCGGCGAGGCGTTCAA
CCCAACCTATATCCGCCCCTGGCAAGGCGAGGCGATCCAGCTCAAGGAAGACGCCATCGAAGCGAGCGACGCGCTGGAGG
CGAGCCAGCACGGCGCGCTCGACGCCCGCACGCTGGTGCAACGCCGCGCCGTGCTGGAACTGATGGCGCAGCAACCGCGC
GTCGTGAACCTCGGCGTGGGCATGCCGGCAGCGGTCGGCGCCCTGGCTGAACAGGAGGGGGCGCGCGGTTTCACGCTCAC
CGTGGAAGCCGGCCCCATCGGCGGCACGCCGGCAGATGGCCTCAGCTTTGGCGCGTCGGCCTATCCCGAAGCGGTTGTCG
ATCAACCCGCGCAGTTTGACTTCTACGAGGGCGGTGGCATTGATCTCGCCATCCTCGGTCTGGCAGAACTGGACGGCGCC
GGCAACGTCAACGTCAGCCTGTTCGGCGAGGGCGGCGACACCATTGTCGCCGGCGTTGGCGGCTTCATCAACATCACGCA
GAGCGCTCGTTCAATCGTGTTCATGGGCACGCTCACCGCCGGCGGCCTGCAGGTCGAAGCCGAAGGCGGCAAGCTGCGCA
TCGTGCGCGAAGGACGGCTCAAGAAGATCGTGCCCGCCGTGTCGCACCTGACCTTCAACGGTGAATATGCGGCGCGATCG
GGCATTCCCGTGCGCTATGTGACCGAGCGCGCCGTCTTCGAGATGCGCGCCGATGGCAACGGCGGTCGGCGCCTCACCCT
CACAGAAATCGCCCCCGGCATCGATCTGCAGCGTGATGTACTGGACCAGTGTGCCGCAGAGGTTGCCGTGGCAGCCGACC
TACGCGAAATGGACGCTCGCATCTTCCGCCGCGGCGCCATGTGTGCGGGCATCACGCCGGTCTGA

Upstream 100 bases:

>100_bases
GTGCGCCTACCGGCTCGTGCGCCTTGGCGTCGTCATCAGCGGGCGCGCAGCACAGTATTAGTGGTACGGACATCTACAAA
ACAAACAAGACGGAGGAGAC

Downstream 100 bases:

>100_bases
TTTTGAGGCTGTCTATTTACTGATGGGTAGCACTAGAAAACCCATCCACTGTGCCACGCCGCACGCGTTTCTTGGGTGCG
GCGCACACCCCGCAAAGCCT

Product: coenzyme A transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MQVITADEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLTTGEPRDLTLVYSAGQGDRATRGVNHFGNPEMTRCVVG
GHWRSATRLADMALAEQCDAFNLPQGVLTHLYRAIAGGKPGVLTKMGLHTFVDPRTELDPRYHGGAINHRAKAARAAGKA
SWVEYERFRGDDYLFYPSFPLHCVFLRGTAADPRGNISTHEEAFHHELLAMAQAARNSGGIVIAQVRRLVDRHDNLQAIH
VPGILVDYVVVAEDEAEHQMTFGEAFNPTYIRPWQGEAIQLKEDAIEASDALEASQHGALDARTLVQRRAVLELMAQQPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGA
GNVNVSLFGEGGDTIVAGVGGFINITQSARSIVFMGTLTAGGLQVEAEGGKLRIVREGRLKKIVPAVSHLTFNGEYAARS
GIPVRYVTERAVFEMRADGNGGRRLTLTEIAPGIDLQRDVLDQCAAEVAVAADLREMDARIFRRGAMCAGITPV

Sequences:

>Translated_554_residues
MQVITADEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLTTGEPRDLTLVYSAGQGDRATRGVNHFGNPEMTRCVVG
GHWRSATRLADMALAEQCDAFNLPQGVLTHLYRAIAGGKPGVLTKMGLHTFVDPRTELDPRYHGGAINHRAKAARAAGKA
SWVEYERFRGDDYLFYPSFPLHCVFLRGTAADPRGNISTHEEAFHHELLAMAQAARNSGGIVIAQVRRLVDRHDNLQAIH
VPGILVDYVVVAEDEAEHQMTFGEAFNPTYIRPWQGEAIQLKEDAIEASDALEASQHGALDARTLVQRRAVLELMAQQPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGA
GNVNVSLFGEGGDTIVAGVGGFINITQSARSIVFMGTLTAGGLQVEAEGGKLRIVREGRLKKIVPAVSHLTFNGEYAARS
GIPVRYVTERAVFEMRADGNGGRRLTLTEIAPGIDLQRDVLDQCAAEVAVAADLREMDARIFRRGAMCAGITPV
>Mature_554_residues
MQVITADEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLTTGEPRDLTLVYSAGQGDRATRGVNHFGNPEMTRCVVG
GHWRSATRLADMALAEQCDAFNLPQGVLTHLYRAIAGGKPGVLTKMGLHTFVDPRTELDPRYHGGAINHRAKAARAAGKA
SWVEYERFRGDDYLFYPSFPLHCVFLRGTAADPRGNISTHEEAFHHELLAMAQAARNSGGIVIAQVRRLVDRHDNLQAIH
VPGILVDYVVVAEDEAEHQMTFGEAFNPTYIRPWQGEAIQLKEDAIEASDALEASQHGALDARTLVQRRAVLELMAQQPR
VVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADGLSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGA
GNVNVSLFGEGGDTIVAGVGGFINITQSARSIVFMGTLTAGGLQVEAEGGKLRIVREGRLKKIVPAVSHLTFNGEYAARS
GIPVRYVTERAVFEMRADGNGGRRLTLTEIAPGIDLQRDVLDQCAAEVAVAADLREMDARIFRRGAMCAGITPV

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=549, Percent_Identity=37.3406193078324, Blast_Score=344, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 59219; Mature: 59219

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVITADEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLTTGEPRDLTLVYSAGQGD
CEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
RATRGVNHFGNPEMTRCVVGGHWRSATRLADMALAEQCDAFNLPQGVLTHLYRAIAGGKP
CHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GVLTKMGLHTFVDPRTELDPRYHGGAINHRAKAARAAGKASWVEYERFRGDDYLFYPSFP
CCEEHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCC
LHCVFLRGTAADPRGNISTHEEAFHHELLAMAQAARNSGGIVIAQVRRLVDRHDNLQAIH
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCEEEEE
VPGILVDYVVVAEDEAEHQMTFGEAFNPTYIRPWQGEAIQLKEDAIEASDALEASQHGAL
CCCEEEEEEEEECCCCHHHEECCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCCCC
DARTLVQRRAVLELMAQQPRVVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADG
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
LSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGAGNVNVSLFGEGGDTIVAGVG
CCCCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCEEEEECC
GFINITQSARSIVFMGTLTAGGLQVEAEGGKLRIVREGRLKKIVPAVSHLTFNGEYAARS
CEEEECCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHEEECCCCHHCC
GIPVRYVTERAVFEMRADGNGGRRLTLTEIAPGIDLQRDVLDQCAAEVAVAADLREMDAR
CCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFRRGAMCAGITPV
HHHCCCCCCCCCCC
>Mature Secondary Structure
MQVITADEAARLVQPGWTVACAGFVGAGHAEAVTHALERRFLTTGEPRDLTLVYSAGQGD
CEEEECCHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
RATRGVNHFGNPEMTRCVVGGHWRSATRLADMALAEQCDAFNLPQGVLTHLYRAIAGGKP
CHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GVLTKMGLHTFVDPRTELDPRYHGGAINHRAKAARAAGKASWVEYERFRGDDYLFYPSFP
CCEEHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCC
LHCVFLRGTAADPRGNISTHEEAFHHELLAMAQAARNSGGIVIAQVRRLVDRHDNLQAIH
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCEEEEE
VPGILVDYVVVAEDEAEHQMTFGEAFNPTYIRPWQGEAIQLKEDAIEASDALEASQHGAL
CCCEEEEEEEEECCCCHHHEECCCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHCCCC
DARTLVQRRAVLELMAQQPRVVNLGVGMPAAVGALAEQEGARGFTLTVEAGPIGGTPADG
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
LSFGASAYPEAVVDQPAQFDFYEGGGIDLAILGLAELDGAGNVNVSLFGEGGDTIVAGVG
CCCCCCCCCHHHHCCCCCCCEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCEEEEECC
GFINITQSARSIVFMGTLTAGGLQVEAEGGKLRIVREGRLKKIVPAVSHLTFNGEYAARS
CEEEECCCCCEEEEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHEEECCCCHHCC
GIPVRYVTERAVFEMRADGNGGRRLTLTEIAPGIDLQRDVLDQCAAEVAVAADLREMDAR
CCCEEEEECCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFRRGAMCAGITPV
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]