Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927435
Identifier: 187927435
GI number: 187927435
Start: 353021
End: 353437
Strand: Direct
Name: 187927435
Synonym: Rpic_0332
Alternate gene names: NA
Gene position: 353021-353437 (Clockwise)
Preceding gene: 187927434
Following gene: 187927436
Centisome position: 8.95
GC content: 66.91
Gene sequence:
>417_bases ATGGCTGGACTTTCCGCCGACACCCCGCACCCCACCGGCATCACCGTGCACACGCAATCGCGTGTGCTACAGATCGCCTT TGCTGATGGCAAGCAGTTCAGCCTGCCGTTCGAATACCTGCGCGTGCTGTCGCCGTCGGCCGAAGTGCAGGGGCATGGGC CCGGCCAGGAAGTGCTGCAGACCGGCAAGCGCGAGGTGGGCATCGTCGGCGTCGAGCCGGTGGGCAATTACGCGATCCGG CCGCTGTTCTCCGACGGCCACGATTCCGGCATCTTCGATTGGGCCTACCTGTACCGCCTCGGCATTGAGCACGGCGCGCT GTGGCAGGCCTATCTCGATCGCCTGGCTGCTGCCGGCGTCGACCGCGACGCTCCGATGGCAGAGAACGCCGGCCACGCCT GCGGCCACAGTCACTGA
Upstream 100 bases:
>100_bases GATCCGTTGACTGCGGTAAGCTATCGGGTGGTGGAAGAGCCTGCGCACATGGCGCTGGCGGCTTCCTGAAACACCGTTTT TGACTCGACGAGACGTTTTC
Downstream 100 bases:
>100_bases TTCCCGATTCATTTCGCGGCGCCCCTGTGCGCTGCATCCGCATCCCTTTCTGTCATGAGCCAAACCCACTTCGGATTCCA GCAGGTCGATGAGCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAGLSADTPHPTGITVHTQSRVLQIAFADGKQFSLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIR PLFSDGHDSGIFDWAYLYRLGIEHGALWQAYLDRLAAAGVDRDAPMAENAGHACGHSH
Sequences:
>Translated_138_residues MAGLSADTPHPTGITVHTQSRVLQIAFADGKQFSLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIR PLFSDGHDSGIFDWAYLYRLGIEHGALWQAYLDRLAAAGVDRDAPMAENAGHACGHSH >Mature_137_residues AGLSADTPHPTGITVHTQSRVLQIAFADGKQFSLPFEYLRVLSPSAEVQGHGPGQEVLQTGKREVGIVGVEPVGNYAIRP LFSDGHDSGIFDWAYLYRLGIEHGALWQAYLDRLAAAGVDRDAPMAENAGHACGHSH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14819; Mature: 14688
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLSADTPHPTGITVHTQSRVLQIAFADGKQFSLPFEYLRVLSPSAEVQGHGPGQEVLQ CCCCCCCCCCCCCEEEECCCEEEEEEECCCCEECCCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVGIVGVEPVGNYAIRPLFSDGHDSGIFDWAYLYRLGIEHGALWQAYLDRLAAAGV CCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DRDAPMAENAGHACGHSH CCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGLSADTPHPTGITVHTQSRVLQIAFADGKQFSLPFEYLRVLSPSAEVQGHGPGQEVLQ CCCCCCCCCCCCEEEECCCEEEEEEECCCCEECCCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVGIVGVEPVGNYAIRPLFSDGHDSGIFDWAYLYRLGIEHGALWQAYLDRLAAAGV CCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCC DRDAPMAENAGHACGHSH CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA