Click here to switch to the map view.

The map label for this gene is spmB [H]

Identifier: 187927430

GI number: 187927430

Start: 344465

End: 345712

Strand: Direct

Name: spmB [H]

Synonym: Rpic_0327

Alternate gene names: 187927430

Gene position: 344465-345712 (Clockwise)

Preceding gene: 187927429

Following gene: 187927431

Centisome position: 8.74

GC content: 65.38

Gene sequence:

>1248_bases
GTGGCCCTGAATCTCGTCTGGCTCGCCTTCTTTCTCGTCGCCTTCGTTACCGCATGCGTGCAGGTGGTGCAGGGCGACAT
GGAAGTCTTCTCCCGCATGCTGACCGGTATGTTCGATGCCGCGCGCACCGGCTTCGAAATCGCGATCGGCCTGACCGGCA
TGATGGCGCTGTGGCTGGGCATCATGCGCGTGGGCGAGCGCGCCGGCGTGGTCGATCTGTTCGCGCGCCTCGTGAACCCG
CTGATGCGGCACCTGTTTCCTTCCGTGCCCGCCGGCCACCCCGCCAACGGCGCGATGATGATGAACGTGTCGGCCAACGT
GCTCGGGCTGGATAACGCCGCCACTCCACTGGGCCTGCAGGCCATGCGCGAGCTGCAGCAGATCAATCCGCAGCCGCAAC
GCGCCAGCGATGCGCAGTTGATGTTCGTGGTGCTCAACACAGCGGGGGTGACGCTGGTGCCCACCTCCGTCATCGCCATC
CGCCAGGCCATGGCCGTCAAGCAGGGCCTGGTCGGTTTCAATGCGGCTGACATCTTCCTGCCGACCTTGCTGTCCACGTT
CATCGGCTTCTGCGCGGGCATCGCGGCGGTGGCGTGGTATCAGCGGATCAACCTGTTCAAGCCTGCCCTGCTGGCGTATT
TCGGGGGCTTTGTCGCGACGATGGGGTTGCTGTTTGCGTGGCTGCGCCAGTTTCCGCCGCAGCAGATGGCGGCGTGGATC
GGCCTGATCGGCGCGGGTGCCATCCTGACCATTGTCGTGGCGTTCCTGGTCTGCGGGGCCATTCGCCGCATCAACGTTTA
CGAAACCTTTGTCGATGGCGCCAAGGACGGCTTCCAGGTGGCGATCGGCATCGTCCCGTATCTGGTGGCGGTGCTCGTGG
GCATCGCCGTGTTTCGCGCGGCGGGGTGCATGGATTTCCTGATGCAGGGGCTTTCCGTGCTGTTCACGCACCTCGGCATC
GACACGCGCTTTGTGCCGGCGCTGCCCGTGGGGCTGATGAAGACGCTGTCGGGCGCCGGCGCGCGCGGCCTGATGGTCGA
CGTGATGACCACCTACGGCGTCGATTCCTTCCAGGGCAAGCTGGCCGCCATCATCCAGGGCTCGACCGAGACCACGTTCT
ACGTGCTGGCCGTGTATTTCGGCAGCGTCGGCATCAAGGACACGCGTTACGCGCTGGCCTGCGGGCTGTGGGCCGACCTG
GTCGGGCTGATCGGCGCCGTGCTTGTTGCCTACCTGTTCTTCGCCTGA

Upstream 100 bases:

>100_bases
GTCACATCGGTCGACTACGACAACTTCCACCTGATCCACCCGATCGAGACGCCCCCGCAGGCACAATGACCGGCTTGTCC
GATCCCAACGCGCAACCCCC

Downstream 100 bases:

>100_bases
CCGGCTAGGGCGGCCCCCAAGCGACGCCGCGGCCGCTCGCACTCTACAATCGATCGCATGGAACAGTGGATCGACACGCT
TTTTGCCACGCTCGCCCTGC

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MALNLVWLAFFLVAFVTACVQVVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLGIMRVGERAGVVDLFARLVNP
LMRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQAMRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAI
RQAMAVKQGLVGFNAADIFLPTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVATMGLLFAWLRQFPPQQMAAWI
GLIGAGAILTIVVAFLVCGAIRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMDFLMQGLSVLFTHLGI
DTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADL
VGLIGAVLVAYLFFA

Sequences:

>Translated_415_residues
MALNLVWLAFFLVAFVTACVQVVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLGIMRVGERAGVVDLFARLVNP
LMRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQAMRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAI
RQAMAVKQGLVGFNAADIFLPTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVATMGLLFAWLRQFPPQQMAAWI
GLIGAGAILTIVVAFLVCGAIRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMDFLMQGLSVLFTHLGI
DTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADL
VGLIGAVLVAYLFFA
>Mature_414_residues
ALNLVWLAFFLVAFVTACVQVVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLGIMRVGERAGVVDLFARLVNPL
MRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQAMRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAIR
QAMAVKQGLVGFNAADIFLPTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVATMGLLFAWLRQFPPQQMAAWIG
LIGAGAILTIVVAFLVCGAIRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRAAGCMDFLMQGLSVLFTHLGID
TRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGKLAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLV
GLIGAVLVAYLFFA

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG2715

COG function: function code R; Uncharacterized membrane protein, required for spore maturation in B.subtilis.

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 44264; Mature: 44133

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLVWLAFFLVAFVTACVQVVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMRVGERAGVVDLFARLVNPLMRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQ
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHH
AMRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAIRQAMAVKQGLVGFNAADIFL
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVATMGLLFAWLRQFPPQQMAAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLIGAGAILTIVVAFLVCGAIRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCMDFLMQGLSVLFTHLGIDTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCH
LAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLVGLIGAVLVAYLFFA
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ALNLVWLAFFLVAFVTACVQVVQGDMEVFSRMLTGMFDAARTGFEIAIGLTGMMALWLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMRVGERAGVVDLFARLVNPLMRHLFPSVPAGHPANGAMMMNVSANVLGLDNAATPLGLQ
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCCCCHHHH
AMRELQQINPQPQRASDAQLMFVVLNTAGVTLVPTSVIAIRQAMAVKQGLVGFNAADIFL
HHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHH
PTLLSTFIGFCAGIAAVAWYQRINLFKPALLAYFGGFVATMGLLFAWLRQFPPQQMAAWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLIGAGAILTIVVAFLVCGAIRRINVYETFVDGAKDGFQVAIGIVPYLVAVLVGIAVFRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCMDFLMQGLSVLFTHLGIDTRFVPALPVGLMKTLSGAGARGLMVDVMTTYGVDSFQGK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHCCH
LAAIIQGSTETTFYVLAVYFGSVGIKDTRYALACGLWADLVGLIGAVLVAYLFFA
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]