Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927406
Identifier: 187927406
GI number: 187927406
Start: 318763
End: 319566
Strand: Reverse
Name: 187927406
Synonym: Rpic_0302
Alternate gene names: NA
Gene position: 319566-318763 (Counterclockwise)
Preceding gene: 187927407
Following gene: 187927405
Centisome position: 8.11
GC content: 70.4
Gene sequence:
>804_bases ATGACCCGACTCAGCGCCTTCATCGAGAGCGCCGGCATCCTCGGGCCCGGTCTGCCGGATTGGCCGCATACGGCCGACGT GCTTGCCGGCCGTGCGCGCTACGCACACGCACCGACCGAGTTGCCGCCGCCAGCCGGCCTGCCGTCGGTCGAACGCCGCC GCACGGGGCCGGTGGTCAAGCTCGCCCTGGCAGTCGGCCACGAGGCTGTCGCAGCCAGCGGACGCGATGCCGCTACGCTG GCCACGGTCTTCAGTTCGTCCGGCGGCGACGGCCATAACTGCAACGCCATCTGTGAAACCCTGGCGGGGGACGACCGCAA GCTCTCACCTACGCGTTTTCACAACTCCGTGCACAACGCGCCAGCCGGCTACTGGAGCATCGCCACGCACGCGATGGCAC CGTCCAACGTGCTGTGCGCGTACGACGGCAGCTTTGCCGCCGGCCTGCTGGACGGCCTCTGCCAGGTCGCGATTGACGCC ACGCCCGCGCTGGTGATCGCGTATGACGGCGACTACCCGGAACCGCTGAACGCGGTGCGCCCCGTGCCCGATCCGTTTGC AGTGGCGCTGGTGCTCGCGCCCGAAGCCGGCCCGCGCACGCTCGCGCGCATTGACGTTGCGCTGACCGACGCGCCGCTCA CGGCGTTGGCACAACCCGGGCTCGAAACGCTGTGGCACGGCAACGCCGCAGCCCGCGCGCTGCCGCTGCTAGAAGCGTTG GCCGCACGGCGCGCAGGCCGCGTGGTGCTCGAGTACCTGCACGAGACCCGCGTACAGGTCGACATCACCTTCGGCACGCC ATGA
Upstream 100 bases:
>100_bases GCCACGCCCGCGTTCGCACGGCACTCAGCAACGCCTTCGGATTTGGCGGCACGAATTGCAGCCTGGTCTTCGGCCGCGCA GATCACCTGGGCCTGTCGTC
Downstream 100 bases:
>100_bases CGTCAAACGCGCAGCCAACCCCGCCGCTCGACCGCAACTGGATCGCAGCGCGTATCCCACACAGCGGCACGATGTGCCTG CTCGACACCGTCGTCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTRLSAFIESAGILGPGLPDWPHTADVLAGRARYAHAPTELPPPAGLPSVERRRTGPVVKLALAVGHEAVAASGRDAATL ATVFSSSGGDGHNCNAICETLAGDDRKLSPTRFHNSVHNAPAGYWSIATHAMAPSNVLCAYDGSFAAGLLDGLCQVAIDA TPALVIAYDGDYPEPLNAVRPVPDPFAVALVLAPEAGPRTLARIDVALTDAPLTALAQPGLETLWHGNAAARALPLLEAL AARRAGRVVLEYLHETRVQVDITFGTP
Sequences:
>Translated_267_residues MTRLSAFIESAGILGPGLPDWPHTADVLAGRARYAHAPTELPPPAGLPSVERRRTGPVVKLALAVGHEAVAASGRDAATL ATVFSSSGGDGHNCNAICETLAGDDRKLSPTRFHNSVHNAPAGYWSIATHAMAPSNVLCAYDGSFAAGLLDGLCQVAIDA TPALVIAYDGDYPEPLNAVRPVPDPFAVALVLAPEAGPRTLARIDVALTDAPLTALAQPGLETLWHGNAAARALPLLEAL AARRAGRVVLEYLHETRVQVDITFGTP >Mature_266_residues TRLSAFIESAGILGPGLPDWPHTADVLAGRARYAHAPTELPPPAGLPSVERRRTGPVVKLALAVGHEAVAASGRDAATLA TVFSSSGGDGHNCNAICETLAGDDRKLSPTRFHNSVHNAPAGYWSIATHAMAPSNVLCAYDGSFAAGLLDGLCQVAIDAT PALVIAYDGDYPEPLNAVRPVPDPFAVALVLAPEAGPRTLARIDVALTDAPLTALAQPGLETLWHGNAAARALPLLEALA ARRAGRVVLEYLHETRVQVDITFGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27747; Mature: 27616
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSAFIESAGILGPGLPDWPHTADVLAGRARYAHAPTELPPPAGLPSVERRRTGPVVK CCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHCCCCCEE LALAVGHEAVAASGRDAATLATVFSSSGGDGHNCNAICETLAGDDRKLSPTRFHNSVHNA EHHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCC PAGYWSIATHAMAPSNVLCAYDGSFAAGLLDGLCQVAIDATPALVIAYDGDYPEPLNAVR CCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCC PVPDPFAVALVLAPEAGPRTLARIDVALTDAPLTALAQPGLETLWHGNAAARALPLLEAL CCCCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHH AARRAGRVVLEYLHETRVQVDITFGTP HHHHHHHHHHHHHHHCEEEEEEEECCC >Mature Secondary Structure TRLSAFIESAGILGPGLPDWPHTADVLAGRARYAHAPTELPPPAGLPSVERRRTGPVVK CHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHCCCCCEE LALAVGHEAVAASGRDAATLATVFSSSGGDGHNCNAICETLAGDDRKLSPTRFHNSVHNA EHHHHCCHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCC PAGYWSIATHAMAPSNVLCAYDGSFAAGLLDGLCQVAIDATPALVIAYDGDYPEPLNAVR CCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCC PVPDPFAVALVLAPEAGPRTLARIDVALTDAPLTALAQPGLETLWHGNAAARALPLLEAL CCCCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHH AARRAGRVVLEYLHETRVQVDITFGTP HHHHHHHHHHHHHHHCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA