Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is yuiH [H]
Identifier: 187927401
GI number: 187927401
Start: 314927
End: 315718
Strand: Direct
Name: yuiH [H]
Synonym: Rpic_0297
Alternate gene names: 187927401
Gene position: 314927-315718 (Clockwise)
Preceding gene: 187927400
Following gene: 187927402
Centisome position: 7.99
GC content: 58.59
Gene sequence:
>792_bases ATGAAGATATTCAAAGCTCCCAGATTCGACGGCATTGATGGTGACGCTGTGCTCATCGAGGCACGCCGGCAGATTGCCCG TCACGTCAACCTGCCCGCGCGTCGTGCTTTCCTGCAGCGCTCGCTCACGCTGGGCGGCCTGTCGCTGCTGACCGGCTGCA GCATCTCTGACAACGAGCAGGTCGAGGCGGCTCTCTCGCGTATCTCACGCTTCAACGACAAGGTTCAGGGCCTGATCTTT GACCCGAACCAACTGGCCCCCACGTACCCTGACTCGATGATCACGCGCCCCTTTCCGTTCAATGCCTACTACGGCGAGGA TGAGGTGCGCCAGGTTGATGAGCAGGCATGGCGGCTTGAGGTTACCGGTCTTGTCTCCGACCGACGTCAATGGAATCTAG CCGACCTGCGTGCGATGCAACAGTACGACCAAGTGACACGCCATATCTGCGTGGAGGGCTGGAGTGCGATCGGTAAGTGG GGAGGCGTGCGCTTTGGTGACTTTCTACGCCGAGTTGGCGCCGACTTGAGCGCCAAATACGTCGGTTTCAAGTGCGCTGA CGACTACCACACCAGCATCGACATGGCGACCGCGCTACATCCTCAGACACTCATGGCCATAACCTATGACGGCGCGCCGT TACCTCCGAAGTATGGCTTCCCGATGAAGCTGCGAATGCCCACCAAGCTGGGCTACAAGAATCCGAAGCATATTCAGGCC ATTTTTGTGACCAATACCTATCCCGGTGGCTACTGGGAAGACCAGGGCTACAACTGGTTCGGCGGGAGTTGA
Upstream 100 bases:
>100_bases CTCTGGTGCCACGCACCCTGCTGACGATGTTAGGCGGCCGCGTGGCTGGCACCCCCTCCCCGATCCAGGACCGGTCGTCG CACGACGCCTGATTCGTCCC
Downstream 100 bases:
>100_bases GCCCCACGTCCGCTCCCCGGACTGTGGCTTGGCTGCCAATGAAAGCGAGAGGCCGTGTTCACAAGGACCGCGCCATATCT ATAGGCAACGCAAGCATCAT
Product: molybdopterin binding oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKIFKAPRFDGIDGDAVLIEARRQIARHVNLPARRAFLQRSLTLGGLSLLTGCSISDNEQVEAALSRISRFNDKVQGLIF DPNQLAPTYPDSMITRPFPFNAYYGEDEVRQVDEQAWRLEVTGLVSDRRQWNLADLRAMQQYDQVTRHICVEGWSAIGKW GGVRFGDFLRRVGADLSAKYVGFKCADDYHTSIDMATALHPQTLMAITYDGAPLPPKYGFPMKLRMPTKLGYKNPKHIQA IFVTNTYPGGYWEDQGYNWFGGS
Sequences:
>Translated_263_residues MKIFKAPRFDGIDGDAVLIEARRQIARHVNLPARRAFLQRSLTLGGLSLLTGCSISDNEQVEAALSRISRFNDKVQGLIF DPNQLAPTYPDSMITRPFPFNAYYGEDEVRQVDEQAWRLEVTGLVSDRRQWNLADLRAMQQYDQVTRHICVEGWSAIGKW GGVRFGDFLRRVGADLSAKYVGFKCADDYHTSIDMATALHPQTLMAITYDGAPLPPKYGFPMKLRMPTKLGYKNPKHIQA IFVTNTYPGGYWEDQGYNWFGGS >Mature_263_residues MKIFKAPRFDGIDGDAVLIEARRQIARHVNLPARRAFLQRSLTLGGLSLLTGCSISDNEQVEAALSRISRFNDKVQGLIF DPNQLAPTYPDSMITRPFPFNAYYGEDEVRQVDEQAWRLEVTGLVSDRRQWNLADLRAMQQYDQVTRHICVEGWSAIGKW GGVRFGDFLRRVGADLSAKYVGFKCADDYHTSIDMATALHPQTLMAITYDGAPLPPKYGFPMKLRMPTKLGYKNPKHIQA IFVTNTYPGGYWEDQGYNWFGGS
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788282, Length=156, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 29777; Mature: 29777
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFKAPRFDGIDGDAVLIEARRQIARHVNLPARRAFLQRSLTLGGLSLLTGCSISDNEQ CCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHH VEAALSRISRFNDKVQGLIFDPNQLAPTYPDSMITRPFPFNAYYGEDEVRQVDEQAWRLE HHHHHHHHHHHCHHHCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHEEE VTGLVSDRRQWNLADLRAMQQYDQVTRHICVEGWSAIGKWGGVRFGDFLRRVGADLSAKY EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE VGFKCADDYHTSIDMATALHPQTLMAITYDGAPLPPKYGFPMKLRMPTKLGYKNPKHIQA EEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEE IFVTNTYPGGYWEDQGYNWFGGS EEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIFKAPRFDGIDGDAVLIEARRQIARHVNLPARRAFLQRSLTLGGLSLLTGCSISDNEQ CCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHH VEAALSRISRFNDKVQGLIFDPNQLAPTYPDSMITRPFPFNAYYGEDEVRQVDEQAWRLE HHHHHHHHHHHCHHHCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHEEE VTGLVSDRRQWNLADLRAMQQYDQVTRHICVEGWSAIGKWGGVRFGDFLRRVGADLSAKY EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE VGFKCADDYHTSIDMATALHPQTLMAITYDGAPLPPKYGFPMKLRMPTKLGYKNPKHIQA EEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEE IFVTNTYPGGYWEDQGYNWFGGS EEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]