Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is psiF [C]
Identifier: 187927366
GI number: 187927366
Start: 274942
End: 275283
Strand: Reverse
Name: psiF [C]
Synonym: Rpic_0259
Alternate gene names: 187927366
Gene position: 275283-274942 (Counterclockwise)
Preceding gene: 187927367
Following gene: 187927365
Centisome position: 6.98
GC content: 62.87
Gene sequence:
>342_bases ATGAAACAACTGATTGCCGCTTGCGCCCTGGCGCTCCCGTTCCTGGCTGGCCAGGCATTCGCCCAAGGCAGCGCACCCGC AGCCGCGCCGGCCGCACCTGCTGCCGCCCCGGCAGCCAAGAATTCGCAGCAAGACAAGATGAAGCAATGCAACATGGACG CCGCCGGCAAGAAAGGCGACGAGCGCAAGGCTTTCATGAAAGGCTGCCTGTCGGACAAGCCGGCAGCTGCCGCCAAGCCG ATGACGCAGCAGGAAAAGATGGCAGCCTGCTCCAAAGCCAACAAGGGCAAGAAGGGCGACGAGTACAAGAACGCCCAGAA AGCGTGCCTCTCGAACGGCTGA
Upstream 100 bases:
>100_bases TGGGAGGGAATGCGCCGAGCACGCACGCGGCGGCGTTCATCGCGAGCGTGGCGGTTTGTCTCCGCCCGCTCTTCTGTCGG TACCCAAGGAGAACACGACG
Downstream 100 bases:
>100_bases GCGCCCGTTAGCCTCGCTTCAAAAAGGCGGCCGCATCGGTCGCCTTTTTTTTGTTGGCCGCTGCTTTGCAACACAGGGAT GCTATCCTCGCGGCATGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate Starvation-Inducible Protein PsiF; Protein Induced By Phosphate Starvation; Phosphate Starvation Inducible PsiF; PsiF Repeat Protein; Signal Peptide Protein; PsiF Repeat-Containing Protein
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKQLIAACALALPFLAGQAFAQGSAPAAAPAAPAAAPAAKNSQQDKMKQCNMDAAGKKGDERKAFMKGCLSDKPAAAAKP MTQQEKMAACSKANKGKKGDEYKNAQKACLSNG
Sequences:
>Translated_113_residues MKQLIAACALALPFLAGQAFAQGSAPAAAPAAPAAAPAAKNSQQDKMKQCNMDAAGKKGDERKAFMKGCLSDKPAAAAKP MTQQEKMAACSKANKGKKGDEYKNAQKACLSNG >Mature_113_residues MKQLIAACALALPFLAGQAFAQGSAPAAAPAAPAAAPAAKNSQQDKMKQCNMDAAGKKGDERKAFMKGCLSDKPAAAAKP MTQQEKMAACSKANKGKKGDEYKNAQKACLSNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11544; Mature: 11544
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLIAACALALPFLAGQAFAQGSAPAAAPAAPAAAPAAKNSQQDKMKQCNMDAAGKKGD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH ERKAFMKGCLSDKPAAAAKPMTQQEKMAACSKANKGKKGDEYKNAQKACLSNG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKQLIAACALALPFLAGQAFAQGSAPAAAPAAPAAAPAAKNSQQDKMKQCNMDAAGKKGD CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH ERKAFMKGCLSDKPAAAAKPMTQQEKMAACSKANKGKKGDEYKNAQKACLSNG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA