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The map label for this gene is 187927354

Identifier: 187927354

GI number: 187927354

Start: 261893

End: 262528

Strand: Reverse

Name: 187927354

Synonym: Rpic_0247

Alternate gene names: NA

Gene position: 262528-261893 (Counterclockwise)

Preceding gene: 187927355

Following gene: 187927348

Centisome position: 6.66

GC content: 68.71

Gene sequence:

>636_bases
ATGACACCGTTCGCCATACTGACCTCACGCCCCGCCGTGCTGGCGGGTCTGGCGCTCGGACTTGCAGCCAGCCTGCCGGT
GCACGCACAGGTGTATCGCTGCAGCGAGAACGGCCAGACGACCTATTCCGACCATCCGTGCGGTACGCGTGCGAAGCCCG
TGCCGCTGATCGACAACACGCCCAGCGCCGCCGACCAGAAGGCTGCCCGCGAACGCGCCAGCGCCGAAGCCGCCGAAGTG
CAGCAGATGGAAACCGCGCGCCGCAAAGCGCAGGCTGCGGAAGACGCCCGCGAGGCCCAGATGGCCGCGCAGGCGGCCGA
ACAGGCGCGCCGCGACCAACGGCAGAAAGTGGTGGTTGCGCAGGAGGGCGTTCGCTACTGCCATCGCGTCTACGTTGGGC
CGCTGCCCTATCCGCAACCCTATCCGACACCGATGCCGGTGATCCGCCAGCCTCCCGCGCCGGCTGCTGGCGCACTTCGC
CAACCCGGCAATGGCCCGAAGCCGTTCGCGCAAGCACCTGTGGCGCCCACACCGATCGTGCCGCGCCCCCCGCATCCGCA
TTACCCGTACTACCGCATCGTCTGCGAGCCCGGCTATGCCTACGAAGGGCCGGAAGATCTGCTGCCAATCCAGTAG

Upstream 100 bases:

>100_bases
GAGCCTCGATGCGCTGCCTGAGCTGATTGCCGGCAACGCCGAGAAAGCGATGATGCGCCTGCATACCGCACACTGATCCG
CCAGCACTGAGGACACCGCC

Downstream 100 bases:

>100_bases
GCGCACCGCCAACAAGACGGTAGGCACAATGAAAAGAGACGGCCAGAGCCGTCTCTTTTTTGTGTGCTCACGCCGCGCGT
GGTGGTGCGGAGGTGAGCTG

Product: putative proline-rich transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTPFAILTSRPAVLAGLALGLAASLPVHAQVYRCSENGQTTYSDHPCGTRAKPVPLIDNTPSAADQKAARERASAEAAEV
QQMETARRKAQAAEDAREAQMAAQAAEQARRDQRQKVVVAQEGVRYCHRVYVGPLPYPQPYPTPMPVIRQPPAPAAGALR
QPGNGPKPFAQAPVAPTPIVPRPPHPHYPYYRIVCEPGYAYEGPEDLLPIQ

Sequences:

>Translated_211_residues
MTPFAILTSRPAVLAGLALGLAASLPVHAQVYRCSENGQTTYSDHPCGTRAKPVPLIDNTPSAADQKAARERASAEAAEV
QQMETARRKAQAAEDAREAQMAAQAAEQARRDQRQKVVVAQEGVRYCHRVYVGPLPYPQPYPTPMPVIRQPPAPAAGALR
QPGNGPKPFAQAPVAPTPIVPRPPHPHYPYYRIVCEPGYAYEGPEDLLPIQ
>Mature_210_residues
TPFAILTSRPAVLAGLALGLAASLPVHAQVYRCSENGQTTYSDHPCGTRAKPVPLIDNTPSAADQKAARERASAEAAEVQ
QMETARRKAQAAEDAREAQMAAQAAEQARRDQRQKVVVAQEGVRYCHRVYVGPLPYPQPYPTPMPVIRQPPAPAAGALRQ
PGNGPKPFAQAPVAPTPIVPRPPHPHYPYYRIVCEPGYAYEGPEDLLPIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22827; Mature: 22696

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFAILTSRPAVLAGLALGLAASLPVHAQVYRCSENGQTTYSDHPCGTRAKPVPLIDNT
CCCCEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PSAADQKAARERASAEAAEVQQMETARRKAQAAEDAREAQMAAQAAEQARRDQRQKVVVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH
QEGVRYCHRVYVGPLPYPQPYPTPMPVIRQPPAPAAGALRQPGNGPKPFAQAPVAPTPIV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPPHPHYPYYRIVCEPGYAYEGPEDLLPIQ
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPFAILTSRPAVLAGLALGLAASLPVHAQVYRCSENGQTTYSDHPCGTRAKPVPLIDNT
CCCEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PSAADQKAARERASAEAAEVQQMETARRKAQAAEDAREAQMAAQAAEQARRDQRQKVVVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHH
QEGVRYCHRVYVGPLPYPQPYPTPMPVIRQPPAPAAGALRQPGNGPKPFAQAPVAPTPIV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRPPHPHYPYYRIVCEPGYAYEGPEDLLPIQ
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA