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The map label for this gene is fdx [H]

Identifier: 187927353

GI number: 187927353

Start: 261562

End: 261825

Strand: Direct

Name: fdx [H]

Synonym: Rpic_0246

Alternate gene names: 187927353

Gene position: 261562-261825 (Clockwise)

Preceding gene: 187927352

Following gene: 187927361

Centisome position: 6.63

GC content: 59.85

Gene sequence:

>264_bases
ATGGCGCTCATGATTACCGATGAGTGCATCAATTGCGACGTATGCGAGCCAGAGTGCCCCAACGGCGCGATTTCGATGGG
CCCGGAAATCTACGTGATCGACCCGGGCAAATGTACCGAATGCGTCGGCCACTTTGACGAGCCTCAGTGCCAGCAGGTCT
GTCCGGTGGACTGCATCCCCAAGGACCCGGCCCATGAGGAAACGCACGATCAGTTGATGCAGAAGTACACCCAGCTCACC
TCCGCACCACCACGCGCGGCGTGA

Upstream 100 bases:

>100_bases
GGCTCAAGGAAAAGACCGGCAAGACGGAAGGGTCGGGCAAATCGGAATAAAATGACACTTTGGCGAGCGCTGGCTCGCCG
GCCATTTCAAGGAAGGCATC

Downstream 100 bases:

>100_bases
GCACACAAAAAAGAGACGGCTCTGGCCGTCTCTTTTCATTGTGCCTACCGTCTTGTTGGCGGTGCGCCTACTGGATTGGC
AGCAGATCTTCCGGCCCTTC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDCIPKDPAHEETHDQLMQKYTQLT
SAPPRAA

Sequences:

>Translated_87_residues
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDCIPKDPAHEETHDQLMQKYTQLT
SAPPRAA
>Mature_86_residues
ALMITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDCIPKDPAHEETHDQLMQKYTQLTS
APPRAA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=83, Percent_Identity=61.4457831325301, Blast_Score=105, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9552; Mature: 9421

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
14.9 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
14.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDCIP
CEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCC
KDPAHEETHDQLMQKYTQLTSAPPRAA
CCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALMITDECINCDVCEPECPNGAISMGPEIYVIDPGKCTECVGHFDEPQCQQVCPVDCIP
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCC
KDPAHEETHDQLMQKYTQLTSAPPRAA
CCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]