Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is coaD [H]
Identifier: 187927352
GI number: 187927352
Start: 261008
End: 261511
Strand: Direct
Name: coaD [H]
Synonym: Rpic_0245
Alternate gene names: 187927352
Gene position: 261008-261511 (Clockwise)
Preceding gene: 187927351
Following gene: 187927353
Centisome position: 6.62
GC content: 59.92
Gene sequence:
>504_bases ATGGTGATCGCGGTTTATCCCGGCACTTTCGATCCGTTCACGCGCGGCCACGAAGACCTCGTGCGGCGTGCGTCCAACAT CTTCGACGAGCTGATCGTCGGGGTGGCGCAGAGCCCCAACAAGCGGCCGTTCTTCGCGCTGGAAGAGCGCATCGAGATCG CCCGTGAAGTGCTCGGCCATTACCCCAACGTGCGGGTCGAAGGGTTTTCCGGTCTCTTGAAAGATTTCGTGCGCAAAAAC GGCGCGCGCGTCATTGTGCGGGGCCTGCGTGCCGTGTCGGACTTCGAGTACGAATTCCAGATGGCCGGCATGAACCGCTA CCTGCTGCCGGATGTGGAAACCATGTTCCTCACGCCGTCGGATCAGTACCAGTTCATCTCCGGTACGTTCGTCCGCGAAA TCGCCGTGCTCGGCGGTGACGTCAGCAAGTTCGTGTTCCCGTCGGTCGAAAAATGGCTCAAGGAAAAGACCGGCAAGACG GAAGGGTCGGGCAAATCGGAATAA
Upstream 100 bases:
>100_bases TGCCGCGCTCGATAACGCAACGGTGTCCGAATGCAGTACCGGCGCGGCCATGTCCCACGCCGACGCTTACGGATGCTCTT TTCCCCTTGGTGGAGGAACC
Downstream 100 bases:
>100_bases AATGACACTTTGGCGAGCGCTGGCTCGCCGGCCATTTCAAGGAAGGCATCATGGCGCTCATGATTACCGATGAGTGCATC AATTGCGACGTATGCGAGCC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVIAVYPGTFDPFTRGHEDLVRRASNIFDELIVGVAQSPNKRPFFALEERIEIAREVLGHYPNVRVEGFSGLLKDFVRKN GARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFLTPSDQYQFISGTFVREIAVLGGDVSKFVFPSVEKWLKEKTGKT EGSGKSE
Sequences:
>Translated_167_residues MVIAVYPGTFDPFTRGHEDLVRRASNIFDELIVGVAQSPNKRPFFALEERIEIAREVLGHYPNVRVEGFSGLLKDFVRKN GARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFLTPSDQYQFISGTFVREIAVLGGDVSKFVFPSVEKWLKEKTGKT EGSGKSE >Mature_167_residues MVIAVYPGTFDPFTRGHEDLVRRASNIFDELIVGVAQSPNKRPFFALEERIEIAREVLGHYPNVRVEGFSGLLKDFVRKN GARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFLTPSDQYQFISGTFVREIAVLGGDVSKFVFPSVEKWLKEKTGKT EGSGKSE
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=155, Percent_Identity=49.6774193548387, Blast_Score=177, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 18903; Mature: 18903
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAVYPGTFDPFTRGHEDLVRRASNIFDELIVGVAQSPNKRPFFALEERIEIAREVLGH CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC YPNVRVEGFSGLLKDFVRKNGARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFLTPS CCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCC DQYQFISGTFVREIAVLGGDVSKFVFPSVEKWLKEKTGKTEGSGKSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVIAVYPGTFDPFTRGHEDLVRRASNIFDELIVGVAQSPNKRPFFALEERIEIAREVLGH CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC YPNVRVEGFSGLLKDFVRKNGARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFLTPS CCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCC DQYQFISGTFVREIAVLGGDVSKFVFPSVEKWLKEKTGKTEGSGKSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]