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The map label for this gene is ftsY [H]

Identifier: 187927348

GI number: 187927348

Start: 255967

End: 257151

Strand: Reverse

Name: ftsY [H]

Synonym: Rpic_0241

Alternate gene names: 187927348

Gene position: 257151-255967 (Counterclockwise)

Preceding gene: 187927354

Following gene: 187927345

Centisome position: 6.52

GC content: 67.43

Gene sequence:

>1185_bases
ATGTTTAGTTTCTGGAAAAAGCGCAAGGCAGAGCCGCAACCGGCCGCCGAACCCACGCCCGCAGCGGCGCCCGAAGCCGC
GCAGGCGCCTGCCCCGGCTGCCATCCCCGGCCCCGCTCCCGTTCCCGCCCCGGTTGCCGCACCCCAGCCCGTCGCTGCAC
CTGCTCCCGGACCTGTCGCTGCGCCGGTCCACACTGCCGTGCCGGATGCGCCTGCCGTGCAGCCTCCACTCGACATGCAA
ACCGACGATATCGAAACCGTGCCGACGCCTGCTGTGATCGAGCAGGCGCGCAAGGGCTGGATGTCACGCCTGCGCTCCGG
CCTGTCGAAGACGAGCAAGGGCCTGACCACGCTGTTCGTGGGCGTGAAGGTGGACGAAGCGCTGTTCGAAGAGCTGGAGA
CCGCCCTGCTCATGGCCGACGCCGGAGTCGACGCCACCGAATACCTGCTCGGCGAACTGCGCCGCCGCATCAAGGCACAG
CGTATCGAAACCGCCGAAGGCGTGAAGACCGCCCTGCGTGACCTGCTGGTCGAGCTGCTGCACCCCTTGGAAAAAACCAT
GGTGCTCGGCCGCGAGCAGCCGATGGTGATCATGATCGCGGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGC
TGTGCAAGCACTTCCAGACCTACGGTCAATCGGTGCTGCTGGCCGCAGGCGACACGTTCCGTGCCGCCGCGCGCGAGCAA
CTCGTGATCTGGGGACAGCGCAACAACGTCACGGTCGTGGCGCAGGAATCGGGCGACCCCGCCGCCGTGATCTTCGATGC
AGTAAACGCCGCACGCGCACGCGGCATCGACATCGTCATGGCGGACACCGCTGGCCGCCTGCCGACGCAGCTGCACCTGA
TGGAAGAGCTGAAGAAGGTGCGCCGCGTGACCGCCAAGGCGATGGCCACGGCGCCGCACGAAACGCTGCTGGTGATCGAC
GGCAACACGGGGCAGAACGCCCTCGCGCAAGTCAAAGCCTTTGACGAAGCGCTGGGCCTCACGGGCCTGATCGTCACCAA
GCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCGGTGCCGGTGTACTTCATCGGCGTGG
GCGAGCAGGTTGAGGACCTGCAGCCGTTTTCCGCGCGCGAATTTGCGGATGCGTTGTTGGGTTGA

Upstream 100 bases:

>100_bases
ACCGGGCCCGGTTTGAAACGATTCGCATGGAAGAGCGCATAAGGGCTGTCTGATAAAATTCGACGCTTGATTCTAACGGC
GAAATAGACTGCCTTTTACG

Downstream 100 bases:

>100_bases
CCACCCTCGCGCGCAACGCTCCAACGTAGAAACGCCCTGACTTGATCAGGGCGTTTTGTTTTGCGCAGTACCGCTACAAA
TTACGCGGAAACCGCATCCG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFSFWKKRKAEPQPAAEPTPAAAPEAAQAPAPAAIPGPAPVPAPVAAPQPVAAPAPGPVAAPVHTAVPDAPAVQPPLDMQ
TDDIETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRIKAQ
RIETAEGVKTALRDLLVELLHPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQ
LVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVTAKAMATAPHETLLVID
GNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Sequences:

>Translated_394_residues
MFSFWKKRKAEPQPAAEPTPAAAPEAAQAPAPAAIPGPAPVPAPVAAPQPVAAPAPGPVAAPVHTAVPDAPAVQPPLDMQ
TDDIETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRIKAQ
RIETAEGVKTALRDLLVELLHPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQ
LVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVTAKAMATAPHETLLVID
GNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
>Mature_394_residues
MFSFWKKRKAEPQPAAEPTPAAAPEAAQAPAPAAIPGPAPVPAPVAAPQPVAAPAPGPVAAPVHTAVPDAPAVQPPLDMQ
TDDIETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRIKAQ
RIETAEGVKTALRDLLVELLHPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQ
LVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVTAKAMATAPHETLLVID
GNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=290, Percent_Identity=32.7586206896552, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI226371618, Length=261, Percent_Identity=32.5670498084291, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI295424842, Length=288, Percent_Identity=30.5555555555556, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI23308697, Length=288, Percent_Identity=30.5555555555556, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=37.2262773722628, Blast_Score=89, Evalue=8e-18,
Organism=Escherichia coli, GI1789874, Length=418, Percent_Identity=42.1052631578947, Blast_Score=287, Evalue=7e-79,
Organism=Escherichia coli, GI1788963, Length=273, Percent_Identity=34.0659340659341, Blast_Score=141, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=275, Percent_Identity=29.0909090909091, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=300, Percent_Identity=30.3333333333333, Blast_Score=107, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=310, Percent_Identity=31.2903225806452, Blast_Score=135, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=255, Percent_Identity=28.2352941176471, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=32.258064516129, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24641198, Length=264, Percent_Identity=29.5454545454545, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 41567; Mature: 41567

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFWKKRKAEPQPAAEPTPAAAPEAAQAPAPAAIPGPAPVPAPVAAPQPVAAPAPGPVA
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APVHTAVPDAPAVQPPLDMQTDDIETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFV
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GVKVDEALFEELETALLMADAGVDATEYLLGELRRRIKAQRIETAEGVKTALRDLLVELL
EEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQ
HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCE
LVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKV
EEEEECCCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
RRVTAKAMATAPHETLLVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAI
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
ARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
HHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MFSFWKKRKAEPQPAAEPTPAAAPEAAQAPAPAAIPGPAPVPAPVAAPQPVAAPAPGPVA
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APVHTAVPDAPAVQPPLDMQTDDIETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFV
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GVKVDEALFEELETALLMADAGVDATEYLLGELRRRIKAQRIETAEGVKTALRDLLVELL
EEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQ
HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCE
LVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKV
EEEEECCCCEEEEEECCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
RRVTAKAMATAPHETLLVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAI
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
ARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
HHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]