Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010682 |
Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187927256
Identifier: 187927256
GI number: 187927256
Start: 167380
End: 167733
Strand: Reverse
Name: 187927256
Synonym: Rpic_0148
Alternate gene names: NA
Gene position: 167733-167380 (Counterclockwise)
Preceding gene: 187927257
Following gene: 187927255
Centisome position: 4.25
GC content: 64.69
Gene sequence:
>354_bases ATGAAGGCGCGCATCGACAGCACCATCCCCGTGCTTGCCTCGCTGGACCTGCAGGAGTCGGCCCGCTTCTATACGGAGCG GCTGGGGTTCACGCAGGCACTGATCGCAGACGACTACCTGATCGTGCAGCGCGATGGCACTGAAATCCATTTCTGGCTGT GCGACGACCGCCGCATTGCCGAGCACACCTCGTGCTACCTGCGTGTGCCGAGCACGCAGGCGCTGTTTGAAGAATTCACC GCGCGCGGGCTGGAGCTCGCGCCGCCGGCGGTGCGTCCGTGGGGCATGAAAGAGCTCTACGTGATCGACCCGCACGGCAA CCTGTTGAAGCTCGGCGAATACGCCCCCGCCTGA
Upstream 100 bases:
>100_bases TGCTGCGGCACCACGCCGGAGCACATCAAGGCGATCGCCGACCGCGTGGCCAACCGCAAGCCGCGTGCATGGCCCGGCCA GTATCTCGAAGCCGCCTGAC
Downstream 100 bases:
>100_bases CCGAACCCCGCACCATCATGACCGACCACCCCATGCGCCTCTCTGGCCTCGAGCCGTTCAACATCGGCGAGAGCACGCTG TTCGTCAACGTCGGCGAGCG
Product: Glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKARIDSTIPVLASLDLQESARFYTERLGFTQALIADDYLIVQRDGTEIHFWLCDDRRIAEHTSCYLRVPSTQALFEEFT ARGLELAPPAVRPWGMKELYVIDPHGNLLKLGEYAPA
Sequences:
>Translated_117_residues MKARIDSTIPVLASLDLQESARFYTERLGFTQALIADDYLIVQRDGTEIHFWLCDDRRIAEHTSCYLRVPSTQALFEEFT ARGLELAPPAVRPWGMKELYVIDPHGNLLKLGEYAPA >Mature_117_residues MKARIDSTIPVLASLDLQESARFYTERLGFTQALIADDYLIVQRDGTEIHFWLCDDRRIAEHTSCYLRVPSTQALFEEFT ARGLELAPPAVRPWGMKELYVIDPHGNLLKLGEYAPA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13325; Mature: 13325
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIDSTIPVLASLDLQESARFYTERLGFTQALIADDYLIVQRDGTEIHFWLCDDRRIA CCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEEEEEECCCCCC EHTSCYLRVPSTQALFEEFTARGLELAPPAVRPWGMKELYVIDPHGNLLKLGEYAPA CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCC >Mature Secondary Structure MKARIDSTIPVLASLDLQESARFYTERLGFTQALIADDYLIVQRDGTEIHFWLCDDRRIA CCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCEEEEEECCCEEEEEEECCCCCC EHTSCYLRVPSTQALFEEFTARGLELAPPAVRPWGMKELYVIDPHGNLLKLGEYAPA CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA