Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is ydhL [C]
Identifier: 187927220
GI number: 187927220
Start: 131628
End: 131894
Strand: Reverse
Name: ydhL [C]
Synonym: Rpic_0112
Alternate gene names: 187927220
Gene position: 131894-131628 (Counterclockwise)
Preceding gene: 187927221
Following gene: 187927219
Centisome position: 3.35
GC content: 67.04
Gene sequence:
>267_bases ATGGACGCCTGCACCCGCGCGCAATTGAAGCGCTCGCTCGGCAAGCTGCGCAATAGCCAACCGCAGGCCGAGCGCGCCCA GCCGGTGGCATCGCCGTGCATCAGCGTGTGCAAGATGGACGAAGCGCGCGGCCTGTGCATCGGCTGCATGCGCACGATCG ACGAAATTGCCTCGTGGTCGACCATGAATGACGCGGCTCGTCTGGCCGTGTGGAAAACCTTGCCCGAGCGCGCCTGCGCC TGGCTCAACGACGCGCCCTGCGCCTGA
Upstream 100 bases:
>100_bases CCGGCCACCCGCATGCCGTGTTCAACCTGACGCCTGCCGAACTGGAAGCCATGACCGGCGCGCCCGTGGCCGACATCGCC CAGCGCGACTGATCGAACAC
Downstream 100 bases:
>100_bases CCGCTCATCACCATGGCCGAACACGACGTCGTCACCTTGCCCAATTCGATGCGCGTGTTCGAGCGCGGCTGGCTGTCGTC GAACAACATCCTGTTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MDACTRAQLKRSLGKLRNSQPQAERAQPVASPCISVCKMDEARGLCIGCMRTIDEIASWSTMNDAARLAVWKTLPERACA WLNDAPCA
Sequences:
>Translated_88_residues MDACTRAQLKRSLGKLRNSQPQAERAQPVASPCISVCKMDEARGLCIGCMRTIDEIASWSTMNDAARLAVWKTLPERACA WLNDAPCA >Mature_88_residues MDACTRAQLKRSLGKLRNSQPQAERAQPVASPCISVCKMDEARGLCIGCMRTIDEIASWSTMNDAARLAVWKTLPERACA WLNDAPCA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9653; Mature: 9653
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 8.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDACTRAQLKRSLGKLRNSQPQAERAQPVASPCISVCKMDEARGLCIGCMRTIDEIASWS CCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC TMNDAARLAVWKTLPERACAWLNDAPCA CHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDACTRAQLKRSLGKLRNSQPQAERAQPVASPCISVCKMDEARGLCIGCMRTIDEIASWS CCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC TMNDAARLAVWKTLPERACAWLNDAPCA CHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA