Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 187927219

GI number: 187927219

Start: 130662

End: 131615

Strand: Reverse

Name: ycbL [C]

Synonym: Rpic_0111

Alternate gene names: 187927219

Gene position: 131615-130662 (Counterclockwise)

Preceding gene: 187927220

Following gene: 187927218

Centisome position: 3.34

GC content: 66.46

Gene sequence:

>954_bases
ATGGCCGAACACGACGTCGTCACCTTGCCCAATTCGATGCGCGTGTTCGAGCGCGGCTGGCTGTCGTCGAACAACATCCT
GTTTTTCGATGACGAAGCGCACGGCGGTTGCGCGCTGGTCGACTCCGGCTACCTCACGCACGCGCCGCAAACCGTGGCGC
TTGTGCAGCACGCGCTGCGAGGCAGGCCGCTGCGCCGTCTGCTGAACACGCACCTGCATTCCGACCACTGCGGCGGCAAT
GCAGCGCTGCAGGCCCTCTACGGCAGCCACACGCGCGTACCCGCCGCGCAGATCGACGACGTGCGCCGCTGGGATACCGA
CGCCCTCAGCTACGGCCCCACCGGCCAGGAATGCGCACGCTTCGCGTTGCCTGACAGCGATGCCGACGCGGGGCTGTCGG
ACGGCATGACGGCCCGACTGGGAGGCTTCGACTGGCAGGTCATCAGCGCGCCGGGGCACGACCCGCACGCGGTCATTCTG
TTCAGCCCCGACACGCGCGTGCTGATTTCGGCCGACGCCCTGTGGGAACGTGGCTTCGGCGTGATCTTTCCCGAGCTGGA
AGGCGAGAGTGGCTTTGCCGAACAGCAGGCCATTCTTGAGCGCATCGTGCAGCTCGATGCGCTCGTGGTGATTCCCGGAC
ACGGCCGGCCGTTCACCAACGTCAACGCCGCGATTGATGCATCGCTCGGGCGGCTTGCGTATCTGCGGGCAGACCCGGAA
CGCAACGCGCTGCACGCCATCCGCGTGCTGGTGAAGTTCAAGCTGCTGGAGCAGCAGGCGCTGTCGCACGAGGCGCTGTT
TGCGTGGTTCACACAGACCACGCTGATGCCGCGCTTGCACGCACGCTTCTTCGCAGCCCAATCGATGGAGACGTTGCTGG
ATGCTGCGATTGCGGCGCTGGTCAAGGCGGGCGCCGCCACCGTCGAACACGGCCGCATCCTGAACCGCGATTGA

Upstream 100 bases:

>100_bases
GACCATGAATGACGCGGCTCGTCTGGCCGTGTGGAAAACCTTGCCCGAGCGCGCCTGCGCCTGGCTCAACGACGCGCCCT
GCGCCTGACCGCTCATCACC

Downstream 100 bases:

>100_bases
CGTGCCGCGCGGTGGCAGTGCCCCGCTACAATGCAGCGACGCCTCTTCTCTTCGCCTGGGCATGCCGAAACCCGCCACAT
CCAATCCGCCCGAATCTGCC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein; Beta-Lactamase

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGN
AALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVIL
FSPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE
RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD

Sequences:

>Translated_317_residues
MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGN
AALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVIL
FSPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE
RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD
>Mature_316_residues
AEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALRGRPLRRLLNTHLHSDHCGGNA
ALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECARFALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILF
SPDTRVLISADALWERGFGVIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPER
NALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAALVKAGAATVEHGRILNRD

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34604; Mature: 34472

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00743 BETA_LACTAMASE_B_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALR
CCCCCEEECCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHC
GRPLRRLLNTHLHSDHCGGNAALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECAR
CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILFSPDTRVLISADALWERGFG
HCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHCCCE
VIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE
EEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC
RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAGAATVEHGRILNRD
HHHCCHHHHCCEECCCC
>Mature Secondary Structure 
AEHDVVTLPNSMRVFERGWLSSNNILFFDDEAHGGCALVDSGYLTHAPQTVALVQHALR
CCCCEEECCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHC
GRPLRRLLNTHLHSDHCGGNAALQALYGSHTRVPAAQIDDVRRWDTDALSYGPTGQECAR
CCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FALPDSDADAGLSDGMTARLGGFDWQVISAPGHDPHAVILFSPDTRVLISADALWERGFG
HCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCEEEEEEHHHHHCCCE
VIFPELEGESGFAEQQAILERIVQLDALVVIPGHGRPFTNVNAAIDASLGRLAYLRADPE
EEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCCC
RNALHAIRVLVKFKLLEQQALSHEALFAWFTQTTLMPRLHARFFAAQSMETLLDAAIAAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKAGAATVEHGRILNRD
HHHCCHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA